Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5368 | 16327;16328;16329 | chr2:178733074;178733073;178733072 | chr2:179597801;179597800;179597799 |
N2AB | 5051 | 15376;15377;15378 | chr2:178733074;178733073;178733072 | chr2:179597801;179597800;179597799 |
N2A | 4124 | 12595;12596;12597 | chr2:178733074;178733073;178733072 | chr2:179597801;179597800;179597799 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | None | N | 0.087 | 0.126 | 0.144782658237 | gnomAD-4.0.0 | 3.20634E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.89143E-05 | 0 |
S/N | None | None | 0.055 | D | 0.383 | 0.183 | 0.186928172975 | gnomAD-4.0.0 | 1.37251E-06 | None | None | None | None | I | None | 2.99868E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0158E-07 | 0 | 0 |
S/R | None | None | 0.171 | N | 0.473 | 0.265 | 0.306377322295 | gnomAD-4.0.0 | 1.6018E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87877E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0672 | likely_benign | 0.066 | benign | -0.678 | Destabilizing | None | N | 0.093 | neutral | None | None | None | None | I |
S/C | 0.07 | likely_benign | 0.0658 | benign | -0.642 | Destabilizing | None | N | 0.213 | neutral | N | 0.480321137 | None | None | I |
S/D | 0.4784 | ambiguous | 0.4842 | ambiguous | -0.558 | Destabilizing | 0.072 | N | 0.328 | neutral | None | None | None | None | I |
S/E | 0.5869 | likely_pathogenic | 0.5827 | pathogenic | -0.532 | Destabilizing | 0.072 | N | 0.33 | neutral | None | None | None | None | I |
S/F | 0.2195 | likely_benign | 0.2063 | benign | -0.678 | Destabilizing | 0.356 | N | 0.437 | neutral | None | None | None | None | I |
S/G | 0.0808 | likely_benign | 0.0751 | benign | -0.959 | Destabilizing | None | N | 0.087 | neutral | N | 0.474029883 | None | None | I |
S/H | 0.3572 | ambiguous | 0.359 | ambiguous | -1.408 | Destabilizing | 0.628 | D | 0.415 | neutral | None | None | None | None | I |
S/I | 0.126 | likely_benign | 0.1091 | benign | -0.028 | Destabilizing | 0.093 | N | 0.469 | neutral | N | 0.463002026 | None | None | I |
S/K | 0.6622 | likely_pathogenic | 0.6689 | pathogenic | -0.813 | Destabilizing | 0.072 | N | 0.331 | neutral | None | None | None | None | I |
S/L | 0.1051 | likely_benign | 0.0982 | benign | -0.028 | Destabilizing | 0.038 | N | 0.328 | neutral | None | None | None | None | I |
S/M | 0.1852 | likely_benign | 0.1714 | benign | 0.113 | Stabilizing | 0.356 | N | 0.413 | neutral | None | None | None | None | I |
S/N | 0.169 | likely_benign | 0.162 | benign | -0.852 | Destabilizing | 0.055 | N | 0.383 | neutral | D | 0.534539624 | None | None | I |
S/P | 0.6253 | likely_pathogenic | 0.6109 | pathogenic | -0.209 | Destabilizing | 0.356 | N | 0.47 | neutral | None | None | None | None | I |
S/Q | 0.5158 | ambiguous | 0.517 | ambiguous | -0.966 | Destabilizing | 0.356 | N | 0.411 | neutral | None | None | None | None | I |
S/R | 0.5172 | ambiguous | 0.5136 | ambiguous | -0.745 | Destabilizing | 0.171 | N | 0.473 | neutral | N | 0.511470764 | None | None | I |
S/T | 0.0745 | likely_benign | 0.0731 | benign | -0.809 | Destabilizing | None | N | 0.111 | neutral | N | 0.467237197 | None | None | I |
S/V | 0.1262 | likely_benign | 0.1145 | benign | -0.209 | Destabilizing | 0.038 | N | 0.321 | neutral | None | None | None | None | I |
S/W | 0.4047 | ambiguous | 0.3976 | ambiguous | -0.684 | Destabilizing | 0.864 | D | 0.487 | neutral | None | None | None | None | I |
S/Y | 0.1911 | likely_benign | 0.1825 | benign | -0.41 | Destabilizing | 0.356 | N | 0.435 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.