Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC536816327;16328;16329 chr2:178733074;178733073;178733072chr2:179597801;179597800;179597799
N2AB505115376;15377;15378 chr2:178733074;178733073;178733072chr2:179597801;179597800;179597799
N2A412412595;12596;12597 chr2:178733074;178733073;178733072chr2:179597801;179597800;179597799
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: AGT
  • RefSeq wild type template codon: TCA
  • Domain: Ig-37
  • Domain position: 12
  • Structural Position: 16
  • Q(SASA): 0.3489
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/G None None None N 0.087 0.126 0.144782658237 gnomAD-4.0.0 3.20634E-06 None None None None I None 0 0 None 0 0 None 0 0 0 2.89143E-05 0
S/N None None 0.055 D 0.383 0.183 0.186928172975 gnomAD-4.0.0 1.37251E-06 None None None None I None 2.99868E-05 0 None 0 0 None 0 0 9.0158E-07 0 0
S/R None None 0.171 N 0.473 0.265 0.306377322295 gnomAD-4.0.0 1.6018E-06 None None None None I None 0 0 None 0 0 None 0 0 2.87877E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0672 likely_benign 0.066 benign -0.678 Destabilizing None N 0.093 neutral None None None None I
S/C 0.07 likely_benign 0.0658 benign -0.642 Destabilizing None N 0.213 neutral N 0.480321137 None None I
S/D 0.4784 ambiguous 0.4842 ambiguous -0.558 Destabilizing 0.072 N 0.328 neutral None None None None I
S/E 0.5869 likely_pathogenic 0.5827 pathogenic -0.532 Destabilizing 0.072 N 0.33 neutral None None None None I
S/F 0.2195 likely_benign 0.2063 benign -0.678 Destabilizing 0.356 N 0.437 neutral None None None None I
S/G 0.0808 likely_benign 0.0751 benign -0.959 Destabilizing None N 0.087 neutral N 0.474029883 None None I
S/H 0.3572 ambiguous 0.359 ambiguous -1.408 Destabilizing 0.628 D 0.415 neutral None None None None I
S/I 0.126 likely_benign 0.1091 benign -0.028 Destabilizing 0.093 N 0.469 neutral N 0.463002026 None None I
S/K 0.6622 likely_pathogenic 0.6689 pathogenic -0.813 Destabilizing 0.072 N 0.331 neutral None None None None I
S/L 0.1051 likely_benign 0.0982 benign -0.028 Destabilizing 0.038 N 0.328 neutral None None None None I
S/M 0.1852 likely_benign 0.1714 benign 0.113 Stabilizing 0.356 N 0.413 neutral None None None None I
S/N 0.169 likely_benign 0.162 benign -0.852 Destabilizing 0.055 N 0.383 neutral D 0.534539624 None None I
S/P 0.6253 likely_pathogenic 0.6109 pathogenic -0.209 Destabilizing 0.356 N 0.47 neutral None None None None I
S/Q 0.5158 ambiguous 0.517 ambiguous -0.966 Destabilizing 0.356 N 0.411 neutral None None None None I
S/R 0.5172 ambiguous 0.5136 ambiguous -0.745 Destabilizing 0.171 N 0.473 neutral N 0.511470764 None None I
S/T 0.0745 likely_benign 0.0731 benign -0.809 Destabilizing None N 0.111 neutral N 0.467237197 None None I
S/V 0.1262 likely_benign 0.1145 benign -0.209 Destabilizing 0.038 N 0.321 neutral None None None None I
S/W 0.4047 ambiguous 0.3976 ambiguous -0.684 Destabilizing 0.864 D 0.487 neutral None None None None I
S/Y 0.1911 likely_benign 0.1825 benign -0.41 Destabilizing 0.356 N 0.435 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.