Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC538416375;16376;16377 chr2:178733026;178733025;178733024chr2:179597753;179597752;179597751
N2AB506715424;15425;15426 chr2:178733026;178733025;178733024chr2:179597753;179597752;179597751
N2A414012643;12644;12645 chr2:178733026;178733025;178733024chr2:179597753;179597752;179597751
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Ig-37
  • Domain position: 28
  • Structural Position: 42
  • Q(SASA): 0.8274
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs879244251 None 0.966 N 0.386 0.323 0.663891511034 gnomAD-4.0.0 6.84362E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99548E-07 0 0
L/V None None 0.891 N 0.345 0.218 0.615873902259 gnomAD-4.0.0 6.84362E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99548E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2858 likely_benign 0.2436 benign -0.361 Destabilizing 0.688 D 0.347 neutral None None None None I
L/C 0.7477 likely_pathogenic 0.729 pathogenic -0.706 Destabilizing 0.998 D 0.413 neutral None None None None I
L/D 0.7392 likely_pathogenic 0.6929 pathogenic -0.223 Destabilizing 0.842 D 0.491 neutral None None None None I
L/E 0.3901 ambiguous 0.3541 ambiguous -0.32 Destabilizing 0.728 D 0.386 neutral None None None None I
L/F 0.182 likely_benign 0.1583 benign -0.601 Destabilizing 0.966 D 0.386 neutral N 0.506891663 None None I
L/G 0.6094 likely_pathogenic 0.5723 pathogenic -0.447 Destabilizing 0.842 D 0.499 neutral None None None None I
L/H 0.3004 likely_benign 0.2559 benign 0.121 Stabilizing 0.028 N 0.267 neutral N 0.488132544 None None I
L/I 0.14 likely_benign 0.1296 benign -0.258 Destabilizing 0.891 D 0.429 neutral N 0.495674592 None None I
L/K 0.3299 likely_benign 0.2969 benign -0.257 Destabilizing 0.728 D 0.438 neutral None None None None I
L/M 0.1556 likely_benign 0.1428 benign -0.544 Destabilizing 0.991 D 0.404 neutral None None None None I
L/N 0.4608 ambiguous 0.4131 ambiguous -0.082 Destabilizing 0.949 D 0.477 neutral None None None None I
L/P 0.2359 likely_benign 0.2066 benign -0.266 Destabilizing 0.012 N 0.217 neutral N 0.312363352 None None I
L/Q 0.179 likely_benign 0.1508 benign -0.267 Destabilizing 0.172 N 0.153 neutral None None None None I
L/R 0.2523 likely_benign 0.2262 benign 0.178 Stabilizing 0.801 D 0.467 neutral N 0.50619823 None None I
L/S 0.2841 likely_benign 0.2382 benign -0.448 Destabilizing 0.842 D 0.432 neutral None None None None I
L/T 0.3179 likely_benign 0.2694 benign -0.448 Destabilizing 0.915 D 0.435 neutral None None None None I
L/V 0.1296 likely_benign 0.1177 benign -0.266 Destabilizing 0.891 D 0.345 neutral N 0.495674592 None None I
L/W 0.3682 ambiguous 0.3343 benign -0.629 Destabilizing 0.998 D 0.43 neutral None None None None I
L/Y 0.4218 ambiguous 0.3828 ambiguous -0.381 Destabilizing 0.949 D 0.452 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.