Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5384 | 16375;16376;16377 | chr2:178733026;178733025;178733024 | chr2:179597753;179597752;179597751 |
N2AB | 5067 | 15424;15425;15426 | chr2:178733026;178733025;178733024 | chr2:179597753;179597752;179597751 |
N2A | 4140 | 12643;12644;12645 | chr2:178733026;178733025;178733024 | chr2:179597753;179597752;179597751 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs879244251 | None | 0.966 | N | 0.386 | 0.323 | 0.663891511034 | gnomAD-4.0.0 | 6.84362E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99548E-07 | 0 | 0 |
L/V | None | None | 0.891 | N | 0.345 | 0.218 | 0.615873902259 | gnomAD-4.0.0 | 6.84362E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99548E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2858 | likely_benign | 0.2436 | benign | -0.361 | Destabilizing | 0.688 | D | 0.347 | neutral | None | None | None | None | I |
L/C | 0.7477 | likely_pathogenic | 0.729 | pathogenic | -0.706 | Destabilizing | 0.998 | D | 0.413 | neutral | None | None | None | None | I |
L/D | 0.7392 | likely_pathogenic | 0.6929 | pathogenic | -0.223 | Destabilizing | 0.842 | D | 0.491 | neutral | None | None | None | None | I |
L/E | 0.3901 | ambiguous | 0.3541 | ambiguous | -0.32 | Destabilizing | 0.728 | D | 0.386 | neutral | None | None | None | None | I |
L/F | 0.182 | likely_benign | 0.1583 | benign | -0.601 | Destabilizing | 0.966 | D | 0.386 | neutral | N | 0.506891663 | None | None | I |
L/G | 0.6094 | likely_pathogenic | 0.5723 | pathogenic | -0.447 | Destabilizing | 0.842 | D | 0.499 | neutral | None | None | None | None | I |
L/H | 0.3004 | likely_benign | 0.2559 | benign | 0.121 | Stabilizing | 0.028 | N | 0.267 | neutral | N | 0.488132544 | None | None | I |
L/I | 0.14 | likely_benign | 0.1296 | benign | -0.258 | Destabilizing | 0.891 | D | 0.429 | neutral | N | 0.495674592 | None | None | I |
L/K | 0.3299 | likely_benign | 0.2969 | benign | -0.257 | Destabilizing | 0.728 | D | 0.438 | neutral | None | None | None | None | I |
L/M | 0.1556 | likely_benign | 0.1428 | benign | -0.544 | Destabilizing | 0.991 | D | 0.404 | neutral | None | None | None | None | I |
L/N | 0.4608 | ambiguous | 0.4131 | ambiguous | -0.082 | Destabilizing | 0.949 | D | 0.477 | neutral | None | None | None | None | I |
L/P | 0.2359 | likely_benign | 0.2066 | benign | -0.266 | Destabilizing | 0.012 | N | 0.217 | neutral | N | 0.312363352 | None | None | I |
L/Q | 0.179 | likely_benign | 0.1508 | benign | -0.267 | Destabilizing | 0.172 | N | 0.153 | neutral | None | None | None | None | I |
L/R | 0.2523 | likely_benign | 0.2262 | benign | 0.178 | Stabilizing | 0.801 | D | 0.467 | neutral | N | 0.50619823 | None | None | I |
L/S | 0.2841 | likely_benign | 0.2382 | benign | -0.448 | Destabilizing | 0.842 | D | 0.432 | neutral | None | None | None | None | I |
L/T | 0.3179 | likely_benign | 0.2694 | benign | -0.448 | Destabilizing | 0.915 | D | 0.435 | neutral | None | None | None | None | I |
L/V | 0.1296 | likely_benign | 0.1177 | benign | -0.266 | Destabilizing | 0.891 | D | 0.345 | neutral | N | 0.495674592 | None | None | I |
L/W | 0.3682 | ambiguous | 0.3343 | benign | -0.629 | Destabilizing | 0.998 | D | 0.43 | neutral | None | None | None | None | I |
L/Y | 0.4218 | ambiguous | 0.3828 | ambiguous | -0.381 | Destabilizing | 0.949 | D | 0.452 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.