Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5387 | 16384;16385;16386 | chr2:178733017;178733016;178733015 | chr2:179597744;179597743;179597742 |
N2AB | 5070 | 15433;15434;15435 | chr2:178733017;178733016;178733015 | chr2:179597744;179597743;179597742 |
N2A | 4143 | 12652;12653;12654 | chr2:178733017;178733016;178733015 | chr2:179597744;179597743;179597742 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs371501460 | -0.16 | 0.425 | N | 0.447 | 0.33 | 0.492542987314 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
R/G | rs371501460 | -0.16 | 0.425 | N | 0.447 | 0.33 | 0.492542987314 | gnomAD-4.0.0 | 1.36867E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.74728E-05 | 0 | 0 | 0 | 0 |
R/T | rs748155563 | 0.286 | 0.003 | N | 0.189 | 0.292 | 0.340273420219 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 2.03488E-04 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
R/T | rs748155563 | 0.286 | 0.003 | N | 0.189 | 0.292 | 0.340273420219 | gnomAD-4.0.0 | 6.04941E-05 | None | None | None | None | I | None | 0 | 2.05997E-04 | None | 0 | 7.78556E-04 | None | 0 | 0 | 0 | 0 | 3.02608E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1556 | likely_benign | 0.1548 | benign | -0.006 | Destabilizing | 0.176 | N | 0.303 | neutral | None | None | None | None | I |
R/C | 0.1772 | likely_benign | 0.1676 | benign | -0.175 | Destabilizing | 0.995 | D | 0.444 | neutral | None | None | None | None | I |
R/D | 0.3027 | likely_benign | 0.3005 | benign | -0.134 | Destabilizing | 0.704 | D | 0.531 | neutral | None | None | None | None | I |
R/E | 0.1661 | likely_benign | 0.1637 | benign | -0.082 | Destabilizing | 0.329 | N | 0.369 | neutral | None | None | None | None | I |
R/F | 0.3628 | ambiguous | 0.3623 | ambiguous | -0.26 | Destabilizing | 0.944 | D | 0.483 | neutral | None | None | None | None | I |
R/G | 0.1328 | likely_benign | 0.1296 | benign | -0.181 | Destabilizing | 0.425 | N | 0.447 | neutral | N | 0.430105748 | None | None | I |
R/H | 0.0783 | likely_benign | 0.0755 | benign | -0.625 | Destabilizing | 0.981 | D | 0.493 | neutral | None | None | None | None | I |
R/I | 0.1584 | likely_benign | 0.1512 | benign | 0.417 | Stabilizing | 0.704 | D | 0.576 | neutral | None | None | None | None | I |
R/K | 0.0771 | likely_benign | 0.0735 | benign | -0.097 | Destabilizing | 0.001 | N | 0.126 | neutral | N | 0.426582653 | None | None | I |
R/L | 0.1367 | likely_benign | 0.1355 | benign | 0.417 | Stabilizing | 0.329 | N | 0.423 | neutral | None | None | None | None | I |
R/M | 0.1478 | likely_benign | 0.1411 | benign | 0.027 | Stabilizing | 0.975 | D | 0.501 | neutral | N | 0.495098589 | None | None | I |
R/N | 0.2321 | likely_benign | 0.225 | benign | 0.118 | Stabilizing | 0.495 | N | 0.41 | neutral | None | None | None | None | I |
R/P | 0.7243 | likely_pathogenic | 0.7092 | pathogenic | 0.296 | Stabilizing | 0.828 | D | 0.581 | neutral | None | None | None | None | I |
R/Q | 0.0766 | likely_benign | 0.0745 | benign | 0.01 | Stabilizing | 0.704 | D | 0.439 | neutral | None | None | None | None | I |
R/S | 0.171 | likely_benign | 0.1666 | benign | -0.203 | Destabilizing | 0.27 | N | 0.353 | neutral | N | 0.407322102 | None | None | I |
R/T | 0.0829 | likely_benign | 0.0778 | benign | -0.028 | Destabilizing | 0.003 | N | 0.189 | neutral | N | 0.400532202 | None | None | I |
R/V | 0.176 | likely_benign | 0.1719 | benign | 0.296 | Stabilizing | 0.329 | N | 0.453 | neutral | None | None | None | None | I |
R/W | 0.1675 | likely_benign | 0.1624 | benign | -0.335 | Destabilizing | 0.993 | D | 0.445 | neutral | D | 0.532712827 | None | None | I |
R/Y | 0.2603 | likely_benign | 0.2591 | benign | 0.073 | Stabilizing | 0.981 | D | 0.517 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.