Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5388 | 16387;16388;16389 | chr2:178733014;178733013;178733012 | chr2:179597741;179597740;179597739 |
N2AB | 5071 | 15436;15437;15438 | chr2:178733014;178733013;178733012 | chr2:179597741;179597740;179597739 |
N2A | 4144 | 12655;12656;12657 | chr2:178733014;178733013;178733012 | chr2:179597741;179597740;179597739 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs796743868 | -0.237 | 0.835 | N | 0.52 | 0.405 | 0.623711697247 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/L | rs796743868 | -0.237 | 0.835 | N | 0.52 | 0.405 | 0.623711697247 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.79386E-04 |
V/L | rs796743868 | -0.237 | 0.835 | N | 0.52 | 0.405 | 0.623711697247 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.79386E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.533 | ambiguous | 0.5684 | pathogenic | -1.392 | Destabilizing | 0.91 | D | 0.689 | prob.neutral | D | 0.55458377 | None | None | I |
V/C | 0.8987 | likely_pathogenic | 0.9121 | pathogenic | -0.9 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/D | 0.9586 | likely_pathogenic | 0.9547 | pathogenic | -0.942 | Destabilizing | 0.996 | D | 0.852 | deleterious | None | None | None | None | I |
V/E | 0.9173 | likely_pathogenic | 0.9113 | pathogenic | -0.844 | Destabilizing | 0.994 | D | 0.821 | deleterious | D | 0.600632733 | None | None | I |
V/F | 0.4002 | ambiguous | 0.3696 | ambiguous | -0.823 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | I |
V/G | 0.7002 | likely_pathogenic | 0.7201 | pathogenic | -1.807 | Destabilizing | 0.994 | D | 0.82 | deleterious | D | 0.600632733 | None | None | I |
V/H | 0.9668 | likely_pathogenic | 0.9646 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
V/I | 0.0855 | likely_benign | 0.0806 | benign | -0.313 | Destabilizing | 0.155 | N | 0.227 | neutral | None | None | None | None | I |
V/K | 0.9578 | likely_pathogenic | 0.9533 | pathogenic | -1.005 | Destabilizing | 0.996 | D | 0.828 | deleterious | None | None | None | None | I |
V/L | 0.3997 | ambiguous | 0.3657 | ambiguous | -0.313 | Destabilizing | 0.835 | D | 0.52 | neutral | N | 0.520634207 | None | None | I |
V/M | 0.3718 | ambiguous | 0.3628 | ambiguous | -0.337 | Destabilizing | 0.994 | D | 0.665 | neutral | D | 0.568190403 | None | None | I |
V/N | 0.8971 | likely_pathogenic | 0.8938 | pathogenic | -0.937 | Destabilizing | 0.996 | D | 0.86 | deleterious | None | None | None | None | I |
V/P | 0.8947 | likely_pathogenic | 0.8881 | pathogenic | -0.638 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | I |
V/Q | 0.9233 | likely_pathogenic | 0.9163 | pathogenic | -0.923 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | I |
V/R | 0.934 | likely_pathogenic | 0.9273 | pathogenic | -0.755 | Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | I |
V/S | 0.7661 | likely_pathogenic | 0.7863 | pathogenic | -1.584 | Destabilizing | 0.942 | D | 0.827 | deleterious | None | None | None | None | I |
V/T | 0.588 | likely_pathogenic | 0.6083 | pathogenic | -1.345 | Destabilizing | 0.304 | N | 0.396 | neutral | None | None | None | None | I |
V/W | 0.9674 | likely_pathogenic | 0.9632 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
V/Y | 0.8753 | likely_pathogenic | 0.863 | pathogenic | -0.743 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.