Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5394 | 16405;16406;16407 | chr2:178732996;178732995;178732994 | chr2:179597723;179597722;179597721 |
N2AB | 5077 | 15454;15455;15456 | chr2:178732996;178732995;178732994 | chr2:179597723;179597722;179597721 |
N2A | 4150 | 12673;12674;12675 | chr2:178732996;178732995;178732994 | chr2:179597723;179597722;179597721 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 0.028 | N | 0.243 | 0.197 | 0.183819452728 | gnomAD-4.0.0 | 3.18372E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71713E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2309 | likely_benign | 0.2389 | benign | -0.35 | Destabilizing | 0.309 | N | 0.386 | neutral | N | 0.476164497 | None | None | N |
G/C | 0.3548 | ambiguous | 0.3451 | ambiguous | -0.89 | Destabilizing | 0.994 | D | 0.573 | neutral | D | 0.522768261 | None | None | N |
G/D | 0.1465 | likely_benign | 0.1463 | benign | -0.514 | Destabilizing | 0.003 | N | 0.255 | neutral | N | 0.499698253 | None | None | N |
G/E | 0.1723 | likely_benign | 0.1702 | benign | -0.653 | Destabilizing | 0.037 | N | 0.301 | neutral | None | None | None | None | N |
G/F | 0.7067 | likely_pathogenic | 0.7079 | pathogenic | -0.944 | Destabilizing | 0.953 | D | 0.531 | neutral | None | None | None | None | N |
G/H | 0.3302 | likely_benign | 0.3334 | benign | -0.545 | Destabilizing | 0.996 | D | 0.467 | neutral | None | None | None | None | N |
G/I | 0.5717 | likely_pathogenic | 0.5728 | pathogenic | -0.402 | Destabilizing | 0.953 | D | 0.529 | neutral | None | None | None | None | N |
G/K | 0.3107 | likely_benign | 0.3018 | benign | -0.888 | Destabilizing | 0.742 | D | 0.425 | neutral | None | None | None | None | N |
G/L | 0.5899 | likely_pathogenic | 0.6 | pathogenic | -0.402 | Destabilizing | 0.91 | D | 0.519 | neutral | None | None | None | None | N |
G/M | 0.5837 | likely_pathogenic | 0.5937 | pathogenic | -0.534 | Destabilizing | 0.996 | D | 0.538 | neutral | None | None | None | None | N |
G/N | 0.1884 | likely_benign | 0.1939 | benign | -0.569 | Destabilizing | 0.59 | D | 0.373 | neutral | None | None | None | None | N |
G/P | 0.9547 | likely_pathogenic | 0.9597 | pathogenic | -0.35 | Destabilizing | 0.953 | D | 0.467 | neutral | None | None | None | None | N |
G/Q | 0.2133 | likely_benign | 0.2155 | benign | -0.809 | Destabilizing | 0.91 | D | 0.464 | neutral | None | None | None | None | N |
G/R | 0.2115 | likely_benign | 0.2039 | benign | -0.447 | Destabilizing | 0.884 | D | 0.46 | neutral | N | 0.489571491 | None | None | N |
G/S | 0.1092 | likely_benign | 0.1116 | benign | -0.743 | Destabilizing | 0.028 | N | 0.243 | neutral | N | 0.508280451 | None | None | N |
G/T | 0.2804 | likely_benign | 0.2903 | benign | -0.804 | Destabilizing | 0.59 | D | 0.426 | neutral | None | None | None | None | N |
G/V | 0.4602 | ambiguous | 0.4603 | ambiguous | -0.35 | Destabilizing | 0.884 | D | 0.514 | neutral | N | 0.511411955 | None | None | N |
G/W | 0.5085 | ambiguous | 0.5142 | ambiguous | -1.127 | Destabilizing | 0.996 | D | 0.575 | neutral | None | None | None | None | N |
G/Y | 0.5315 | ambiguous | 0.5298 | ambiguous | -0.774 | Destabilizing | 0.984 | D | 0.531 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.