Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5400 | 16423;16424;16425 | chr2:178732978;178732977;178732976 | chr2:179597705;179597704;179597703 |
N2AB | 5083 | 15472;15473;15474 | chr2:178732978;178732977;178732976 | chr2:179597705;179597704;179597703 |
N2A | 4156 | 12691;12692;12693 | chr2:178732978;178732977;178732976 | chr2:179597705;179597704;179597703 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.317 | N | 0.376 | 0.233 | 0.382592752248 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
S/P | None | None | 0.484 | N | 0.347 | 0.123 | 0.28492961333 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85855E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1216 | likely_benign | 0.1259 | benign | -0.407 | Destabilizing | 0.012 | N | 0.277 | neutral | N | 0.489401115 | None | None | N |
S/C | 0.179 | likely_benign | 0.1752 | benign | -0.344 | Destabilizing | 0.915 | D | 0.29 | neutral | N | 0.469422412 | None | None | N |
S/D | 0.2928 | likely_benign | 0.2726 | benign | 0.312 | Stabilizing | 0.149 | N | 0.314 | neutral | None | None | None | None | N |
S/E | 0.6002 | likely_pathogenic | 0.5834 | pathogenic | 0.253 | Stabilizing | 0.149 | N | 0.311 | neutral | None | None | None | None | N |
S/F | 0.4092 | ambiguous | 0.4197 | ambiguous | -0.934 | Destabilizing | 0.317 | N | 0.376 | neutral | N | 0.489906523 | None | None | N |
S/G | 0.064 | likely_benign | 0.0616 | benign | -0.555 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
S/H | 0.4681 | ambiguous | 0.4417 | ambiguous | -0.931 | Destabilizing | 0.935 | D | 0.289 | neutral | None | None | None | None | N |
S/I | 0.3901 | ambiguous | 0.3863 | ambiguous | -0.145 | Destabilizing | 0.001 | N | 0.269 | neutral | None | None | None | None | N |
S/K | 0.7212 | likely_pathogenic | 0.6947 | pathogenic | -0.416 | Destabilizing | 0.149 | N | 0.323 | neutral | None | None | None | None | N |
S/L | 0.1756 | likely_benign | 0.1818 | benign | -0.145 | Destabilizing | 0.035 | N | 0.341 | neutral | None | None | None | None | N |
S/M | 0.3298 | likely_benign | 0.3362 | benign | -0.122 | Destabilizing | 0.38 | N | 0.291 | neutral | None | None | None | None | N |
S/N | 0.1262 | likely_benign | 0.1141 | benign | -0.255 | Destabilizing | 0.149 | N | 0.356 | neutral | None | None | None | None | N |
S/P | 0.6094 | likely_pathogenic | 0.5889 | pathogenic | -0.202 | Destabilizing | 0.484 | N | 0.347 | neutral | N | 0.461002167 | None | None | N |
S/Q | 0.6465 | likely_pathogenic | 0.6182 | pathogenic | -0.393 | Destabilizing | 0.555 | D | 0.335 | neutral | None | None | None | None | N |
S/R | 0.6441 | likely_pathogenic | 0.611 | pathogenic | -0.252 | Destabilizing | 0.38 | N | 0.334 | neutral | None | None | None | None | N |
S/T | 0.0897 | likely_benign | 0.0919 | benign | -0.321 | Destabilizing | None | N | 0.169 | neutral | N | 0.494537576 | None | None | N |
S/V | 0.3452 | ambiguous | 0.3491 | ambiguous | -0.202 | Destabilizing | 0.035 | N | 0.341 | neutral | None | None | None | None | N |
S/W | 0.5541 | ambiguous | 0.5353 | ambiguous | -0.979 | Destabilizing | 0.935 | D | 0.424 | neutral | None | None | None | None | N |
S/Y | 0.3876 | ambiguous | 0.3764 | ambiguous | -0.671 | Destabilizing | 0.484 | N | 0.361 | neutral | N | 0.471802268 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.