Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5403 | 16432;16433;16434 | chr2:178732969;178732968;178732967 | chr2:179597696;179597695;179597694 |
N2AB | 5086 | 15481;15482;15483 | chr2:178732969;178732968;178732967 | chr2:179597696;179597695;179597694 |
N2A | 4159 | 12700;12701;12702 | chr2:178732969;178732968;178732967 | chr2:179597696;179597695;179597694 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.003 | N | 0.175 | 0.231 | 0.333154297509 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6392 | likely_pathogenic | 0.6665 | pathogenic | -2.669 | Highly Destabilizing | 0.742 | D | 0.531 | neutral | None | None | None | None | N |
Y/C | 0.1678 | likely_benign | 0.1732 | benign | -1.77 | Destabilizing | 0.994 | D | 0.557 | neutral | N | 0.513448731 | None | None | N |
Y/D | 0.5704 | likely_pathogenic | 0.5764 | pathogenic | -1.93 | Destabilizing | 0.939 | D | 0.618 | neutral | N | 0.519551571 | None | None | N |
Y/E | 0.7399 | likely_pathogenic | 0.7522 | pathogenic | -1.747 | Destabilizing | 0.742 | D | 0.553 | neutral | None | None | None | None | N |
Y/F | 0.1262 | likely_benign | 0.1394 | benign | -0.94 | Destabilizing | 0.003 | N | 0.175 | neutral | N | 0.507411738 | None | None | N |
Y/G | 0.5123 | ambiguous | 0.5321 | ambiguous | -3.082 | Highly Destabilizing | 0.854 | D | 0.6 | neutral | None | None | None | None | N |
Y/H | 0.1865 | likely_benign | 0.2016 | benign | -1.556 | Destabilizing | 0.015 | N | 0.37 | neutral | D | 0.526941648 | None | None | N |
Y/I | 0.4999 | ambiguous | 0.5316 | ambiguous | -1.346 | Destabilizing | 0.59 | D | 0.537 | neutral | None | None | None | None | N |
Y/K | 0.7002 | likely_pathogenic | 0.6996 | pathogenic | -1.907 | Destabilizing | 0.59 | D | 0.539 | neutral | None | None | None | None | N |
Y/L | 0.4332 | ambiguous | 0.4524 | ambiguous | -1.346 | Destabilizing | 0.373 | N | 0.489 | neutral | None | None | None | None | N |
Y/M | 0.663 | likely_pathogenic | 0.6907 | pathogenic | -1.208 | Destabilizing | 0.953 | D | 0.564 | neutral | None | None | None | None | N |
Y/N | 0.235 | likely_benign | 0.2517 | benign | -2.536 | Highly Destabilizing | 0.884 | D | 0.587 | neutral | N | 0.511562627 | None | None | N |
Y/P | 0.9274 | likely_pathogenic | 0.9206 | pathogenic | -1.793 | Destabilizing | 0.984 | D | 0.632 | neutral | None | None | None | None | N |
Y/Q | 0.5372 | ambiguous | 0.5467 | ambiguous | -2.27 | Highly Destabilizing | 0.91 | D | 0.577 | neutral | None | None | None | None | N |
Y/R | 0.5108 | ambiguous | 0.5103 | ambiguous | -1.685 | Destabilizing | 0.009 | N | 0.401 | neutral | None | None | None | None | N |
Y/S | 0.3163 | likely_benign | 0.3328 | benign | -3.088 | Highly Destabilizing | 0.684 | D | 0.552 | neutral | N | 0.501585447 | None | None | N |
Y/T | 0.533 | ambiguous | 0.5612 | ambiguous | -2.783 | Highly Destabilizing | 0.854 | D | 0.55 | neutral | None | None | None | None | N |
Y/V | 0.4142 | ambiguous | 0.4462 | ambiguous | -1.793 | Destabilizing | 0.742 | D | 0.508 | neutral | None | None | None | None | N |
Y/W | 0.485 | ambiguous | 0.5074 | ambiguous | -0.313 | Destabilizing | 0.984 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.