Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5404 | 16435;16436;16437 | chr2:178732966;178732965;178732964 | chr2:179597693;179597692;179597691 |
N2AB | 5087 | 15484;15485;15486 | chr2:178732966;178732965;178732964 | chr2:179597693;179597692;179597691 |
N2A | 4160 | 12703;12704;12705 | chr2:178732966;178732965;178732964 | chr2:179597693;179597692;179597691 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs758704167 | -0.528 | 0.012 | N | 0.253 | 0.12 | 0.299770980665 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
R/S | rs758704167 | -0.528 | 0.012 | N | 0.253 | 0.12 | 0.299770980665 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/S | rs758704167 | -0.528 | 0.012 | N | 0.253 | 0.12 | 0.299770980665 | gnomAD-4.0.0 | 1.30154E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69528E-05 | 0 | 1.60164E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2302 | likely_benign | 0.2188 | benign | -0.604 | Destabilizing | 0.007 | N | 0.207 | neutral | None | None | None | None | I |
R/C | 0.1615 | likely_benign | 0.16 | benign | -0.586 | Destabilizing | 0.864 | D | 0.263 | neutral | None | None | None | None | I |
R/D | 0.3793 | ambiguous | 0.3658 | ambiguous | 0.009 | Stabilizing | 0.031 | N | 0.338 | neutral | None | None | None | None | I |
R/E | 0.2129 | likely_benign | 0.1982 | benign | 0.1 | Stabilizing | 0.007 | N | 0.183 | neutral | None | None | None | None | I |
R/F | 0.411 | ambiguous | 0.4152 | ambiguous | -0.65 | Destabilizing | 0.214 | N | 0.33 | neutral | None | None | None | None | I |
R/G | 0.154 | likely_benign | 0.1508 | benign | -0.863 | Destabilizing | 0.024 | N | 0.307 | neutral | D | 0.534849056 | None | None | I |
R/H | 0.0768 | likely_benign | 0.0765 | benign | -1.17 | Destabilizing | 0.214 | N | 0.309 | neutral | None | None | None | None | I |
R/I | 0.1957 | likely_benign | 0.1925 | benign | 0.069 | Stabilizing | 0.038 | N | 0.408 | neutral | None | None | None | None | I |
R/K | 0.09 | likely_benign | 0.0841 | benign | -0.596 | Destabilizing | None | N | 0.094 | neutral | N | 0.488169829 | None | None | I |
R/L | 0.1649 | likely_benign | 0.1625 | benign | 0.069 | Stabilizing | None | N | 0.157 | neutral | None | None | None | None | I |
R/M | 0.2119 | likely_benign | 0.2017 | benign | -0.208 | Destabilizing | 0.171 | N | 0.284 | neutral | N | 0.491025609 | None | None | I |
R/N | 0.2723 | likely_benign | 0.2607 | benign | -0.088 | Destabilizing | 0.031 | N | 0.251 | neutral | None | None | None | None | I |
R/P | 0.7509 | likely_pathogenic | 0.7356 | pathogenic | -0.135 | Destabilizing | 0.136 | N | 0.397 | neutral | None | None | None | None | I |
R/Q | 0.0758 | likely_benign | 0.0747 | benign | -0.306 | Destabilizing | None | N | 0.117 | neutral | None | None | None | None | I |
R/S | 0.2243 | likely_benign | 0.2126 | benign | -0.792 | Destabilizing | 0.012 | N | 0.253 | neutral | N | 0.499445616 | None | None | I |
R/T | 0.1284 | likely_benign | 0.1224 | benign | -0.54 | Destabilizing | None | N | 0.135 | neutral | N | 0.441496177 | None | None | I |
R/V | 0.2324 | likely_benign | 0.2272 | benign | -0.135 | Destabilizing | 0.016 | N | 0.312 | neutral | None | None | None | None | I |
R/W | 0.1688 | likely_benign | 0.1701 | benign | -0.409 | Destabilizing | 0.828 | D | 0.261 | neutral | N | 0.516473698 | None | None | I |
R/Y | 0.2856 | likely_benign | 0.2833 | benign | -0.074 | Destabilizing | 0.356 | N | 0.354 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.