Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC540416435;16436;16437 chr2:178732966;178732965;178732964chr2:179597693;179597692;179597691
N2AB508715484;15485;15486 chr2:178732966;178732965;178732964chr2:179597693;179597692;179597691
N2A416012703;12704;12705 chr2:178732966;178732965;178732964chr2:179597693;179597692;179597691
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: AGG
  • RefSeq wild type template codon: TCC
  • Domain: Ig-37
  • Domain position: 48
  • Structural Position: 122
  • Q(SASA): 0.6471
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/S rs758704167 -0.528 0.012 N 0.253 0.12 0.299770980665 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.91E-06 0
R/S rs758704167 -0.528 0.012 N 0.253 0.12 0.299770980665 gnomAD-3.1.2 1.31E-05 None None None None I None 0 0 0 0 0 None 0 0 2.94E-05 0 0
R/S rs758704167 -0.528 0.012 N 0.253 0.12 0.299770980665 gnomAD-4.0.0 1.30154E-05 None None None None I None 0 0 None 0 0 None 0 0 1.69528E-05 0 1.60164E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.2302 likely_benign 0.2188 benign -0.604 Destabilizing 0.007 N 0.207 neutral None None None None I
R/C 0.1615 likely_benign 0.16 benign -0.586 Destabilizing 0.864 D 0.263 neutral None None None None I
R/D 0.3793 ambiguous 0.3658 ambiguous 0.009 Stabilizing 0.031 N 0.338 neutral None None None None I
R/E 0.2129 likely_benign 0.1982 benign 0.1 Stabilizing 0.007 N 0.183 neutral None None None None I
R/F 0.411 ambiguous 0.4152 ambiguous -0.65 Destabilizing 0.214 N 0.33 neutral None None None None I
R/G 0.154 likely_benign 0.1508 benign -0.863 Destabilizing 0.024 N 0.307 neutral D 0.534849056 None None I
R/H 0.0768 likely_benign 0.0765 benign -1.17 Destabilizing 0.214 N 0.309 neutral None None None None I
R/I 0.1957 likely_benign 0.1925 benign 0.069 Stabilizing 0.038 N 0.408 neutral None None None None I
R/K 0.09 likely_benign 0.0841 benign -0.596 Destabilizing None N 0.094 neutral N 0.488169829 None None I
R/L 0.1649 likely_benign 0.1625 benign 0.069 Stabilizing None N 0.157 neutral None None None None I
R/M 0.2119 likely_benign 0.2017 benign -0.208 Destabilizing 0.171 N 0.284 neutral N 0.491025609 None None I
R/N 0.2723 likely_benign 0.2607 benign -0.088 Destabilizing 0.031 N 0.251 neutral None None None None I
R/P 0.7509 likely_pathogenic 0.7356 pathogenic -0.135 Destabilizing 0.136 N 0.397 neutral None None None None I
R/Q 0.0758 likely_benign 0.0747 benign -0.306 Destabilizing None N 0.117 neutral None None None None I
R/S 0.2243 likely_benign 0.2126 benign -0.792 Destabilizing 0.012 N 0.253 neutral N 0.499445616 None None I
R/T 0.1284 likely_benign 0.1224 benign -0.54 Destabilizing None N 0.135 neutral N 0.441496177 None None I
R/V 0.2324 likely_benign 0.2272 benign -0.135 Destabilizing 0.016 N 0.312 neutral None None None None I
R/W 0.1688 likely_benign 0.1701 benign -0.409 Destabilizing 0.828 D 0.261 neutral N 0.516473698 None None I
R/Y 0.2856 likely_benign 0.2833 benign -0.074 Destabilizing 0.356 N 0.354 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.