Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5411 | 16456;16457;16458 | chr2:178732945;178732944;178732943 | chr2:179597672;179597671;179597670 |
N2AB | 5094 | 15505;15506;15507 | chr2:178732945;178732944;178732943 | chr2:179597672;179597671;179597670 |
N2A | 4167 | 12724;12725;12726 | chr2:178732945;178732944;178732943 | chr2:179597672;179597671;179597670 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs757542282 | -0.135 | 0.669 | N | 0.525 | 0.312 | 0.53782465974 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs757542282 | -0.135 | 0.669 | N | 0.525 | 0.312 | 0.53782465974 | gnomAD-4.0.0 | 1.36862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 0 |
T/P | None | None | 0.966 | D | 0.549 | 0.451 | 0.586114214298 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0896 | likely_benign | 0.0858 | benign | -1.025 | Destabilizing | 0.454 | N | 0.429 | neutral | N | 0.496906743 | None | None | N |
T/C | 0.4696 | ambiguous | 0.4375 | ambiguous | -0.667 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | N |
T/D | 0.4953 | ambiguous | 0.4452 | ambiguous | -0.555 | Destabilizing | 0.842 | D | 0.53 | neutral | None | None | None | None | N |
T/E | 0.4036 | ambiguous | 0.3741 | ambiguous | -0.517 | Destabilizing | 0.842 | D | 0.527 | neutral | None | None | None | None | N |
T/F | 0.2198 | likely_benign | 0.2008 | benign | -0.994 | Destabilizing | 0.949 | D | 0.581 | neutral | None | None | None | None | N |
T/G | 0.2885 | likely_benign | 0.2841 | benign | -1.319 | Destabilizing | 0.728 | D | 0.518 | neutral | None | None | None | None | N |
T/H | 0.3005 | likely_benign | 0.2719 | benign | -1.587 | Destabilizing | 0.998 | D | 0.554 | neutral | None | None | None | None | N |
T/I | 0.1694 | likely_benign | 0.1527 | benign | -0.317 | Destabilizing | 0.669 | D | 0.525 | neutral | N | 0.47941706 | None | None | N |
T/K | 0.2836 | likely_benign | 0.2556 | benign | -0.815 | Destabilizing | 0.801 | D | 0.501 | neutral | N | 0.491634209 | None | None | N |
T/L | 0.1237 | likely_benign | 0.1133 | benign | -0.317 | Destabilizing | 0.016 | N | 0.263 | neutral | None | None | None | None | N |
T/M | 0.0931 | likely_benign | 0.0861 | benign | 0.004 | Stabilizing | 0.949 | D | 0.542 | neutral | None | None | None | None | N |
T/N | 0.1281 | likely_benign | 0.118 | benign | -0.872 | Destabilizing | 0.842 | D | 0.498 | neutral | None | None | None | None | N |
T/P | 0.4739 | ambiguous | 0.4329 | ambiguous | -0.521 | Destabilizing | 0.966 | D | 0.549 | neutral | D | 0.52434406 | None | None | N |
T/Q | 0.2744 | likely_benign | 0.258 | benign | -1.01 | Destabilizing | 0.974 | D | 0.562 | neutral | None | None | None | None | N |
T/R | 0.2247 | likely_benign | 0.2017 | benign | -0.636 | Destabilizing | 0.934 | D | 0.55 | neutral | N | 0.481129214 | None | None | N |
T/S | 0.1099 | likely_benign | 0.1043 | benign | -1.166 | Destabilizing | 0.022 | N | 0.16 | neutral | N | 0.429681673 | None | None | N |
T/V | 0.1384 | likely_benign | 0.1295 | benign | -0.521 | Destabilizing | 0.728 | D | 0.461 | neutral | None | None | None | None | N |
T/W | 0.6045 | likely_pathogenic | 0.572 | pathogenic | -0.92 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | N |
T/Y | 0.289 | likely_benign | 0.2644 | benign | -0.683 | Destabilizing | 0.991 | D | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.