Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5415 | 16468;16469;16470 | chr2:178732933;178732932;178732931 | chr2:179597660;179597659;179597658 |
N2AB | 5098 | 15517;15518;15519 | chr2:178732933;178732932;178732931 | chr2:179597660;179597659;179597658 |
N2A | 4171 | 12736;12737;12738 | chr2:178732933;178732932;178732931 | chr2:179597660;179597659;179597658 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.334 | N | 0.509 | 0.263 | 0.285316908763 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
E/D | None | None | 0.004 | N | 0.271 | 0.082 | 0.282575091529 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
E/K | rs761181567 | -0.695 | 0.007 | N | 0.292 | 0.286 | 0.223847106136 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2721 | likely_benign | 0.2818 | benign | -0.986 | Destabilizing | 0.334 | N | 0.509 | neutral | N | 0.518378093 | None | None | N |
E/C | 0.9192 | likely_pathogenic | 0.9216 | pathogenic | -0.578 | Destabilizing | 0.992 | D | 0.578 | neutral | None | None | None | None | N |
E/D | 0.1804 | likely_benign | 0.1765 | benign | -1.384 | Destabilizing | 0.004 | N | 0.271 | neutral | N | 0.499581689 | None | None | N |
E/F | 0.8412 | likely_pathogenic | 0.8503 | pathogenic | -0.537 | Destabilizing | 0.972 | D | 0.582 | neutral | None | None | None | None | N |
E/G | 0.3599 | ambiguous | 0.3649 | ambiguous | -1.374 | Destabilizing | 0.549 | D | 0.547 | neutral | N | 0.503596455 | None | None | N |
E/H | 0.5332 | ambiguous | 0.5464 | ambiguous | -0.849 | Destabilizing | 0.92 | D | 0.527 | neutral | None | None | None | None | N |
E/I | 0.5032 | ambiguous | 0.5208 | ambiguous | 0.084 | Stabilizing | 0.92 | D | 0.594 | neutral | None | None | None | None | N |
E/K | 0.3611 | ambiguous | 0.3657 | ambiguous | -0.749 | Destabilizing | 0.007 | N | 0.292 | neutral | N | 0.480129136 | None | None | N |
E/L | 0.5497 | ambiguous | 0.5686 | pathogenic | 0.084 | Stabilizing | 0.617 | D | 0.55 | neutral | None | None | None | None | N |
E/M | 0.5891 | likely_pathogenic | 0.609 | pathogenic | 0.597 | Stabilizing | 0.992 | D | 0.577 | neutral | None | None | None | None | N |
E/N | 0.3681 | ambiguous | 0.3738 | ambiguous | -1.187 | Destabilizing | 0.447 | N | 0.453 | neutral | None | None | None | None | N |
E/P | 0.9824 | likely_pathogenic | 0.9849 | pathogenic | -0.252 | Destabilizing | 0.92 | D | 0.579 | neutral | None | None | None | None | N |
E/Q | 0.1834 | likely_benign | 0.1887 | benign | -1.05 | Destabilizing | 0.045 | N | 0.375 | neutral | N | 0.459100503 | None | None | N |
E/R | 0.465 | ambiguous | 0.4769 | ambiguous | -0.562 | Destabilizing | 0.021 | N | 0.378 | neutral | None | None | None | None | N |
E/S | 0.305 | likely_benign | 0.3207 | benign | -1.598 | Destabilizing | 0.447 | N | 0.491 | neutral | None | None | None | None | N |
E/T | 0.3209 | likely_benign | 0.3346 | benign | -1.261 | Destabilizing | 0.617 | D | 0.494 | neutral | None | None | None | None | N |
E/V | 0.3056 | likely_benign | 0.3167 | benign | -0.252 | Destabilizing | 0.712 | D | 0.569 | neutral | N | 0.471971013 | None | None | N |
E/W | 0.9317 | likely_pathogenic | 0.9327 | pathogenic | -0.339 | Destabilizing | 0.992 | D | 0.612 | neutral | None | None | None | None | N |
E/Y | 0.7436 | likely_pathogenic | 0.751 | pathogenic | -0.267 | Destabilizing | 0.972 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.