Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5416 | 16471;16472;16473 | chr2:178732930;178732929;178732928 | chr2:179597657;179597656;179597655 |
N2AB | 5099 | 15520;15521;15522 | chr2:178732930;178732929;178732928 | chr2:179597657;179597656;179597655 |
N2A | 4172 | 12739;12740;12741 | chr2:178732930;178732929;178732928 | chr2:179597657;179597656;179597655 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.994 | D | 0.677 | 0.645 | 0.756989136078 | gnomAD-4.0.0 | 2.05298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69854E-06 | 0 | 0 |
I/V | rs1283439535 | -1.753 | 0.4 | D | 0.287 | 0.497 | 0.717175623165 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs1283439535 | -1.753 | 0.4 | D | 0.287 | 0.497 | 0.717175623165 | gnomAD-4.0.0 | 2.73729E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99509E-07 | 2.31873E-05 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8453 | likely_pathogenic | 0.8516 | pathogenic | -3.122 | Highly Destabilizing | 0.985 | D | 0.692 | prob.neutral | None | None | None | None | N |
I/C | 0.876 | likely_pathogenic | 0.8812 | pathogenic | -2.366 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
I/D | 0.9809 | likely_pathogenic | 0.9795 | pathogenic | -3.684 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
I/E | 0.9696 | likely_pathogenic | 0.9677 | pathogenic | -3.407 | Highly Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
I/F | 0.2718 | likely_benign | 0.2653 | benign | -1.892 | Destabilizing | 0.994 | D | 0.699 | prob.neutral | D | 0.579453953 | None | None | N |
I/G | 0.9487 | likely_pathogenic | 0.9437 | pathogenic | -3.71 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
I/H | 0.935 | likely_pathogenic | 0.9312 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/K | 0.9129 | likely_pathogenic | 0.9012 | pathogenic | -2.554 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
I/L | 0.1646 | likely_benign | 0.1584 | benign | -1.373 | Destabilizing | 0.061 | N | 0.305 | neutral | D | 0.554139082 | None | None | N |
I/M | 0.1244 | likely_benign | 0.1164 | benign | -1.352 | Destabilizing | 0.994 | D | 0.677 | prob.neutral | D | 0.589033424 | None | None | N |
I/N | 0.8092 | likely_pathogenic | 0.7993 | pathogenic | -3.071 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | D | 0.65313051 | None | None | N |
I/P | 0.9877 | likely_pathogenic | 0.9864 | pathogenic | -1.943 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
I/Q | 0.9357 | likely_pathogenic | 0.9293 | pathogenic | -2.859 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
I/R | 0.8804 | likely_pathogenic | 0.8681 | pathogenic | -2.251 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
I/S | 0.8809 | likely_pathogenic | 0.8813 | pathogenic | -3.742 | Highly Destabilizing | 0.997 | D | 0.813 | deleterious | D | 0.65313051 | None | None | N |
I/T | 0.8821 | likely_pathogenic | 0.8874 | pathogenic | -3.315 | Highly Destabilizing | 0.98 | D | 0.738 | prob.delet. | D | 0.62068818 | None | None | N |
I/V | 0.1223 | likely_benign | 0.1344 | benign | -1.943 | Destabilizing | 0.4 | N | 0.287 | neutral | D | 0.560811136 | None | None | N |
I/W | 0.9089 | likely_pathogenic | 0.9049 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
I/Y | 0.7246 | likely_pathogenic | 0.7125 | pathogenic | -2.112 | Highly Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.