Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5424 | 16495;16496;16497 | chr2:178732906;178732905;178732904 | chr2:179597633;179597632;179597631 |
N2AB | 5107 | 15544;15545;15546 | chr2:178732906;178732905;178732904 | chr2:179597633;179597632;179597631 |
N2A | 4180 | 12763;12764;12765 | chr2:178732906;178732905;178732904 | chr2:179597633;179597632;179597631 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.014 | N | 0.148 | 0.114 | 0.16115917748 | gnomAD-4.0.0 | 3.18415E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86599E-05 | 0 |
A/V | rs1466084495 | -0.412 | 0.565 | D | 0.452 | 0.318 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
A/V | rs1466084495 | -0.412 | 0.565 | D | 0.452 | 0.318 | None | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85894E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5085 | ambiguous | 0.5331 | ambiguous | -0.873 | Destabilizing | 0.996 | D | 0.447 | neutral | None | None | None | None | N |
A/D | 0.3583 | ambiguous | 0.4612 | ambiguous | -0.686 | Destabilizing | 0.923 | D | 0.623 | neutral | None | None | None | None | N |
A/E | 0.2488 | likely_benign | 0.3257 | benign | -0.755 | Destabilizing | 0.722 | D | 0.533 | neutral | N | 0.472720374 | None | None | N |
A/F | 0.3733 | ambiguous | 0.4108 | ambiguous | -1.013 | Destabilizing | 0.923 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/G | 0.1388 | likely_benign | 0.1506 | benign | -0.963 | Destabilizing | 0.565 | D | 0.452 | neutral | N | 0.502429993 | None | None | N |
A/H | 0.4896 | ambiguous | 0.5664 | pathogenic | -1.058 | Destabilizing | 0.989 | D | 0.679 | prob.neutral | None | None | None | None | N |
A/I | 0.2597 | likely_benign | 0.2768 | benign | -0.359 | Destabilizing | 0.024 | N | 0.306 | neutral | None | None | None | None | N |
A/K | 0.3579 | ambiguous | 0.4503 | ambiguous | -0.997 | Destabilizing | 0.633 | D | 0.529 | neutral | None | None | None | None | N |
A/L | 0.2348 | likely_benign | 0.2625 | benign | -0.359 | Destabilizing | 0.415 | N | 0.531 | neutral | None | None | None | None | N |
A/M | 0.2271 | likely_benign | 0.2463 | benign | -0.318 | Destabilizing | 0.923 | D | 0.591 | neutral | None | None | None | None | N |
A/N | 0.3012 | likely_benign | 0.3638 | ambiguous | -0.693 | Destabilizing | 0.858 | D | 0.625 | neutral | None | None | None | None | N |
A/P | 0.6746 | likely_pathogenic | 0.7089 | pathogenic | -0.45 | Destabilizing | 0.949 | D | 0.59 | neutral | N | 0.487595795 | None | None | N |
A/Q | 0.3184 | likely_benign | 0.3767 | ambiguous | -0.876 | Destabilizing | 0.923 | D | 0.596 | neutral | None | None | None | None | N |
A/R | 0.2817 | likely_benign | 0.3457 | ambiguous | -0.628 | Destabilizing | 0.923 | D | 0.588 | neutral | None | None | None | None | N |
A/S | 0.0938 | likely_benign | 0.0995 | benign | -1.056 | Destabilizing | 0.014 | N | 0.148 | neutral | N | 0.408612968 | None | None | N |
A/T | 0.0893 | likely_benign | 0.091 | benign | -1.024 | Destabilizing | 0.565 | D | 0.445 | neutral | N | 0.500928483 | None | None | N |
A/V | 0.1354 | likely_benign | 0.1422 | benign | -0.45 | Destabilizing | 0.565 | D | 0.452 | neutral | D | 0.522727907 | None | None | N |
A/W | 0.7668 | likely_pathogenic | 0.8091 | pathogenic | -1.274 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/Y | 0.5092 | ambiguous | 0.5798 | pathogenic | -0.881 | Destabilizing | 0.987 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.