Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5428 | 16507;16508;16509 | chr2:178732894;178732893;178732892 | chr2:179597621;179597620;179597619 |
N2AB | 5111 | 15556;15557;15558 | chr2:178732894;178732893;178732892 | chr2:179597621;179597620;179597619 |
N2A | 4184 | 12775;12776;12777 | chr2:178732894;178732893;178732892 | chr2:179597621;179597620;179597619 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.047 | N | 0.371 | 0.198 | 0.186928172975 | gnomAD-4.0.0 | 1.59287E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86005E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1214 | likely_benign | 0.1081 | benign | -1.375 | Destabilizing | 0.047 | N | 0.371 | neutral | N | 0.499501629 | None | None | N |
T/C | 0.4402 | ambiguous | 0.4048 | ambiguous | -0.954 | Destabilizing | 0.983 | D | 0.607 | neutral | None | None | None | None | N |
T/D | 0.624 | likely_pathogenic | 0.6099 | pathogenic | -1.504 | Destabilizing | 0.418 | N | 0.569 | neutral | None | None | None | None | N |
T/E | 0.4959 | ambiguous | 0.5293 | ambiguous | -1.283 | Destabilizing | 0.418 | N | 0.557 | neutral | None | None | None | None | N |
T/F | 0.2438 | likely_benign | 0.2362 | benign | -1.128 | Destabilizing | 0.716 | D | 0.624 | neutral | None | None | None | None | N |
T/G | 0.4254 | ambiguous | 0.3587 | ambiguous | -1.776 | Destabilizing | 0.264 | N | 0.595 | neutral | None | None | None | None | N |
T/H | 0.2665 | likely_benign | 0.2585 | benign | -1.758 | Destabilizing | 0.836 | D | 0.636 | neutral | None | None | None | None | N |
T/I | 0.1429 | likely_benign | 0.1483 | benign | -0.306 | Destabilizing | 0.002 | N | 0.471 | neutral | N | 0.479244553 | None | None | N |
T/K | 0.3434 | ambiguous | 0.3584 | ambiguous | -0.242 | Destabilizing | 0.004 | N | 0.395 | neutral | None | None | None | None | N |
T/L | 0.1276 | likely_benign | 0.1234 | benign | -0.306 | Destabilizing | 0.061 | N | 0.475 | neutral | None | None | None | None | N |
T/M | 0.1171 | likely_benign | 0.1188 | benign | -0.357 | Destabilizing | 0.061 | N | 0.479 | neutral | None | None | None | None | N |
T/N | 0.2002 | likely_benign | 0.1855 | benign | -0.979 | Destabilizing | 0.213 | N | 0.535 | neutral | N | 0.518619842 | None | None | N |
T/P | 0.7976 | likely_pathogenic | 0.7676 | pathogenic | -0.634 | Destabilizing | 0.794 | D | 0.603 | neutral | D | 0.530229637 | None | None | N |
T/Q | 0.2963 | likely_benign | 0.3038 | benign | -0.773 | Destabilizing | 0.716 | D | 0.607 | neutral | None | None | None | None | N |
T/R | 0.2257 | likely_benign | 0.2346 | benign | -0.492 | Destabilizing | 0.264 | N | 0.567 | neutral | None | None | None | None | N |
T/S | 0.1173 | likely_benign | 0.1034 | benign | -1.273 | Destabilizing | 0.007 | N | 0.309 | neutral | N | 0.515739567 | None | None | N |
T/V | 0.1382 | likely_benign | 0.1429 | benign | -0.634 | Destabilizing | 0.01 | N | 0.27 | neutral | None | None | None | None | N |
T/W | 0.6109 | likely_pathogenic | 0.6072 | pathogenic | -1.208 | Destabilizing | 0.983 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/Y | 0.3137 | likely_benign | 0.2989 | benign | -0.831 | Destabilizing | 0.94 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.