Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5430 | 16513;16514;16515 | chr2:178732888;178732887;178732886 | chr2:179597615;179597614;179597613 |
N2AB | 5113 | 15562;15563;15564 | chr2:178732888;178732887;178732886 | chr2:179597615;179597614;179597613 |
N2A | 4186 | 12781;12782;12783 | chr2:178732888;178732887;178732886 | chr2:179597615;179597614;179597613 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/Q | rs746130933 | -0.744 | 0.175 | N | 0.358 | 0.244 | 0.18274738541 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.68275E-04 | None | 0 | None | 0 | 0 | 0 |
R/Q | rs746130933 | -0.744 | 0.175 | N | 0.358 | 0.244 | 0.18274738541 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/Q | rs746130933 | -0.744 | 0.175 | N | 0.358 | 0.244 | 0.18274738541 | gnomAD-4.0.0 | 3.71924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 4.46768E-05 | None | 0 | 0 | 2.5432E-06 | 1.09868E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5307 | ambiguous | 0.5202 | ambiguous | -1.527 | Destabilizing | 0.447 | N | 0.556 | neutral | None | None | None | None | I |
R/C | 0.2014 | likely_benign | 0.1891 | benign | -1.574 | Destabilizing | 0.992 | D | 0.629 | neutral | None | None | None | None | I |
R/D | 0.8939 | likely_pathogenic | 0.8866 | pathogenic | -0.553 | Destabilizing | 0.617 | D | 0.647 | neutral | None | None | None | None | I |
R/E | 0.4393 | ambiguous | 0.4548 | ambiguous | -0.438 | Destabilizing | 0.25 | N | 0.558 | neutral | None | None | None | None | I |
R/F | 0.6451 | likely_pathogenic | 0.6454 | pathogenic | -1.475 | Destabilizing | 0.92 | D | 0.622 | neutral | None | None | None | None | I |
R/G | 0.5001 | ambiguous | 0.4676 | ambiguous | -1.811 | Destabilizing | 0.756 | D | 0.609 | neutral | N | 0.50006451 | None | None | I |
R/H | 0.1092 | likely_benign | 0.1027 | benign | -1.837 | Destabilizing | 0.012 | N | 0.349 | neutral | None | None | None | None | I |
R/I | 0.3404 | ambiguous | 0.3457 | ambiguous | -0.753 | Destabilizing | 0.92 | D | 0.629 | neutral | None | None | None | None | I |
R/K | 0.1105 | likely_benign | 0.108 | benign | -1.524 | Destabilizing | 0.009 | N | 0.253 | neutral | None | None | None | None | I |
R/L | 0.3295 | likely_benign | 0.325 | benign | -0.753 | Destabilizing | 0.756 | D | 0.623 | neutral | N | 0.489076694 | None | None | I |
R/M | 0.3509 | ambiguous | 0.3484 | ambiguous | -0.894 | Destabilizing | 0.92 | D | 0.599 | neutral | None | None | None | None | I |
R/N | 0.7385 | likely_pathogenic | 0.7229 | pathogenic | -0.91 | Destabilizing | 0.617 | D | 0.595 | neutral | None | None | None | None | I |
R/P | 0.9848 | likely_pathogenic | 0.9843 | pathogenic | -0.994 | Destabilizing | 0.957 | D | 0.649 | neutral | N | 0.511838889 | None | None | I |
R/Q | 0.1015 | likely_benign | 0.0982 | benign | -1.195 | Destabilizing | 0.175 | N | 0.358 | neutral | N | 0.486188317 | None | None | I |
R/S | 0.5631 | ambiguous | 0.5428 | ambiguous | -1.86 | Destabilizing | 0.447 | N | 0.591 | neutral | None | None | None | None | I |
R/T | 0.2771 | likely_benign | 0.2698 | benign | -1.569 | Destabilizing | 0.617 | D | 0.591 | neutral | None | None | None | None | I |
R/V | 0.3981 | ambiguous | 0.4049 | ambiguous | -0.994 | Destabilizing | 0.85 | D | 0.645 | neutral | None | None | None | None | I |
R/W | 0.3187 | likely_benign | 0.3206 | benign | -1.001 | Destabilizing | 0.992 | D | 0.653 | neutral | None | None | None | None | I |
R/Y | 0.5259 | ambiguous | 0.5205 | ambiguous | -0.736 | Destabilizing | 0.85 | D | 0.643 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.