Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5443 | 16552;16553;16554 | chr2:178732849;178732848;178732847 | chr2:179597576;179597575;179597574 |
N2AB | 5126 | 15601;15602;15603 | chr2:178732849;178732848;178732847 | chr2:179597576;179597575;179597574 |
N2A | 4199 | 12820;12821;12822 | chr2:178732849;178732848;178732847 | chr2:179597576;179597575;179597574 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.454 | N | 0.509 | 0.17 | 0.221734844693 | gnomAD-4.0.0 | 2.05559E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.48821E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3993 | ambiguous | 0.4322 | ambiguous | -1.041 | Destabilizing | 0.991 | D | 0.552 | neutral | None | None | None | None | N |
A/D | 0.216 | likely_benign | 0.2859 | benign | -0.598 | Destabilizing | 0.801 | D | 0.639 | neutral | N | 0.464871682 | None | None | N |
A/E | 0.1801 | likely_benign | 0.2369 | benign | -0.648 | Destabilizing | 0.842 | D | 0.544 | neutral | None | None | None | None | N |
A/F | 0.192 | likely_benign | 0.2314 | benign | -0.966 | Destabilizing | 0.949 | D | 0.643 | neutral | None | None | None | None | N |
A/G | 0.1362 | likely_benign | 0.1518 | benign | -0.977 | Destabilizing | 0.625 | D | 0.511 | neutral | N | 0.505622227 | None | None | N |
A/H | 0.306 | likely_benign | 0.3541 | ambiguous | -1.042 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
A/I | 0.1424 | likely_benign | 0.1719 | benign | -0.307 | Destabilizing | 0.728 | D | 0.535 | neutral | None | None | None | None | N |
A/K | 0.2738 | likely_benign | 0.3387 | benign | -0.901 | Destabilizing | 0.842 | D | 0.536 | neutral | None | None | None | None | N |
A/L | 0.1231 | likely_benign | 0.1427 | benign | -0.307 | Destabilizing | 0.525 | D | 0.453 | neutral | None | None | None | None | N |
A/M | 0.1479 | likely_benign | 0.1725 | benign | -0.37 | Destabilizing | 0.325 | N | 0.287 | neutral | None | None | None | None | N |
A/N | 0.1629 | likely_benign | 0.197 | benign | -0.66 | Destabilizing | 0.842 | D | 0.642 | neutral | None | None | None | None | N |
A/P | 0.2884 | likely_benign | 0.342 | ambiguous | -0.414 | Destabilizing | 0.966 | D | 0.592 | neutral | N | 0.472299087 | None | None | N |
A/Q | 0.2276 | likely_benign | 0.2599 | benign | -0.823 | Destabilizing | 0.974 | D | 0.6 | neutral | None | None | None | None | N |
A/R | 0.2479 | likely_benign | 0.289 | benign | -0.595 | Destabilizing | 0.949 | D | 0.589 | neutral | None | None | None | None | N |
A/S | 0.0816 | likely_benign | 0.0858 | benign | -1.086 | Destabilizing | 0.454 | N | 0.509 | neutral | N | 0.410805124 | None | None | N |
A/T | 0.0699 | likely_benign | 0.0764 | benign | -1.027 | Destabilizing | 0.007 | N | 0.157 | neutral | N | 0.384119955 | None | None | N |
A/V | 0.088 | likely_benign | 0.1016 | benign | -0.414 | Destabilizing | 0.454 | N | 0.498 | neutral | N | 0.431009825 | None | None | N |
A/W | 0.5645 | likely_pathogenic | 0.6328 | pathogenic | -1.217 | Destabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | N |
A/Y | 0.2881 | likely_benign | 0.3411 | ambiguous | -0.812 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.