Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5452 | 16579;16580;16581 | chr2:178732707;178732706;178732705 | chr2:179597434;179597433;179597432 |
N2AB | 5135 | 15628;15629;15630 | chr2:178732707;178732706;178732705 | chr2:179597434;179597433;179597432 |
N2A | 4208 | 12847;12848;12849 | chr2:178732707;178732706;178732705 | chr2:179597434;179597433;179597432 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | None | None | 1.0 | N | 0.772 | 0.666 | 0.869393105286 | gnomAD-4.0.0 | 1.64863E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.12617E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9618 | likely_pathogenic | 0.9712 | pathogenic | -2.74 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
F/C | 0.9369 | likely_pathogenic | 0.9466 | pathogenic | -1.712 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.556541138 | None | None | N |
F/D | 0.9955 | likely_pathogenic | 0.9965 | pathogenic | -2.181 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/E | 0.995 | likely_pathogenic | 0.9962 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
F/G | 0.9906 | likely_pathogenic | 0.9921 | pathogenic | -3.139 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
F/H | 0.9778 | likely_pathogenic | 0.9817 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
F/I | 0.6132 | likely_pathogenic | 0.6714 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.49746689 | None | None | N |
F/K | 0.9967 | likely_pathogenic | 0.9975 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
F/L | 0.9676 | likely_pathogenic | 0.9754 | pathogenic | -1.473 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.503363554 | None | None | N |
F/M | 0.8756 | likely_pathogenic | 0.8967 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
F/N | 0.9877 | likely_pathogenic | 0.9893 | pathogenic | -1.853 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
F/P | 0.9944 | likely_pathogenic | 0.9948 | pathogenic | -1.9 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
F/Q | 0.9936 | likely_pathogenic | 0.9949 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
F/R | 0.9902 | likely_pathogenic | 0.9922 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
F/S | 0.9637 | likely_pathogenic | 0.9721 | pathogenic | -2.66 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.556034159 | None | None | N |
F/T | 0.967 | likely_pathogenic | 0.9782 | pathogenic | -2.4 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
F/V | 0.6647 | likely_pathogenic | 0.7236 | pathogenic | -1.9 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.498323898 | None | None | N |
F/W | 0.8757 | likely_pathogenic | 0.8896 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
F/Y | 0.6506 | likely_pathogenic | 0.6717 | pathogenic | -0.729 | Destabilizing | 0.999 | D | 0.624 | neutral | D | 0.556287649 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.