Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5461 | 16606;16607;16608 | chr2:178732680;178732679;178732678 | chr2:179597407;179597406;179597405 |
N2AB | 5144 | 15655;15656;15657 | chr2:178732680;178732679;178732678 | chr2:179597407;179597406;179597405 |
N2A | 4217 | 12874;12875;12876 | chr2:178732680;178732679;178732678 | chr2:179597407;179597406;179597405 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | D | 0.135 | 0.28 | 0.475192790171 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs749477796 | -0.439 | None | N | 0.154 | 0.22 | 0.365892764245 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.15E-06 | 0 |
V/I | rs749477796 | -0.439 | None | N | 0.154 | 0.22 | 0.365892764245 | gnomAD-4.0.0 | 3.44203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.51481E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.129 | likely_benign | 0.1449 | benign | -1.823 | Destabilizing | None | N | 0.135 | neutral | D | 0.53837215 | None | None | N |
V/C | 0.6263 | likely_pathogenic | 0.6819 | pathogenic | -1.275 | Destabilizing | 0.824 | D | 0.567 | neutral | None | None | None | None | N |
V/D | 0.3687 | ambiguous | 0.4814 | ambiguous | -1.983 | Destabilizing | 0.317 | N | 0.641 | neutral | D | 0.545145153 | None | None | N |
V/E | 0.3033 | likely_benign | 0.3985 | ambiguous | -1.835 | Destabilizing | 0.149 | N | 0.592 | neutral | None | None | None | None | N |
V/F | 0.1693 | likely_benign | 0.2128 | benign | -1.085 | Destabilizing | 0.188 | N | 0.626 | neutral | D | 0.551132634 | None | None | N |
V/G | 0.2147 | likely_benign | 0.2605 | benign | -2.296 | Highly Destabilizing | 0.062 | N | 0.577 | neutral | D | 0.526533919 | None | None | N |
V/H | 0.581 | likely_pathogenic | 0.6833 | pathogenic | -1.955 | Destabilizing | 0.935 | D | 0.579 | neutral | None | None | None | None | N |
V/I | 0.0763 | likely_benign | 0.0794 | benign | -0.548 | Destabilizing | None | N | 0.154 | neutral | N | 0.495397383 | None | None | N |
V/K | 0.4321 | ambiguous | 0.5446 | ambiguous | -1.621 | Destabilizing | 0.149 | N | 0.589 | neutral | None | None | None | None | N |
V/L | 0.1693 | likely_benign | 0.206 | benign | -0.548 | Destabilizing | None | N | 0.13 | neutral | N | 0.49971625 | None | None | N |
V/M | 0.1422 | likely_benign | 0.1659 | benign | -0.474 | Destabilizing | 0.38 | N | 0.533 | neutral | None | None | None | None | N |
V/N | 0.297 | likely_benign | 0.3978 | ambiguous | -1.714 | Destabilizing | 0.38 | N | 0.634 | neutral | None | None | None | None | N |
V/P | 0.7986 | likely_pathogenic | 0.8939 | pathogenic | -0.942 | Destabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | N |
V/Q | 0.3611 | ambiguous | 0.4382 | ambiguous | -1.657 | Destabilizing | 0.555 | D | 0.623 | neutral | None | None | None | None | N |
V/R | 0.3522 | ambiguous | 0.4519 | ambiguous | -1.318 | Destabilizing | 0.38 | N | 0.631 | neutral | None | None | None | None | N |
V/S | 0.1827 | likely_benign | 0.2209 | benign | -2.334 | Highly Destabilizing | 0.081 | N | 0.499 | neutral | None | None | None | None | N |
V/T | 0.1498 | likely_benign | 0.1719 | benign | -2.056 | Highly Destabilizing | 0.001 | N | 0.137 | neutral | None | None | None | None | N |
V/W | 0.8013 | likely_pathogenic | 0.8735 | pathogenic | -1.52 | Destabilizing | 0.935 | D | 0.585 | neutral | None | None | None | None | N |
V/Y | 0.5012 | ambiguous | 0.6167 | pathogenic | -1.148 | Destabilizing | 0.555 | D | 0.631 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.