Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5462 | 16609;16610;16611 | chr2:178732677;178732676;178732675 | chr2:179597404;179597403;179597402 |
N2AB | 5145 | 15658;15659;15660 | chr2:178732677;178732676;178732675 | chr2:179597404;179597403;179597402 |
N2A | 4218 | 12877;12878;12879 | chr2:178732677;178732676;178732675 | chr2:179597404;179597403;179597402 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.995 | N | 0.638 | 0.477 | 0.864942860777 | gnomAD-4.0.0 | 1.37563E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.35211E-05 | 0 |
L/Q | rs778031659 | -0.257 | 0.995 | N | 0.613 | 0.269 | 0.833684530568 | gnomAD-2.1.1 | 4.16E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.12E-06 | 0 |
L/Q | rs778031659 | -0.257 | 0.995 | N | 0.613 | 0.269 | 0.833684530568 | gnomAD-4.0.0 | 6.87817E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02433E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1852 | likely_benign | 0.2081 | benign | -0.741 | Destabilizing | 0.851 | D | 0.548 | neutral | None | None | None | None | I |
L/C | 0.4954 | ambiguous | 0.5434 | ambiguous | -0.785 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | I |
L/D | 0.5264 | ambiguous | 0.6129 | pathogenic | -0.061 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | I |
L/E | 0.2701 | likely_benign | 0.3155 | benign | -0.115 | Destabilizing | 0.988 | D | 0.639 | neutral | None | None | None | None | I |
L/F | 0.128 | likely_benign | 0.155 | benign | -0.526 | Destabilizing | 0.976 | D | 0.473 | neutral | None | None | None | None | I |
L/G | 0.4279 | ambiguous | 0.479 | ambiguous | -0.947 | Destabilizing | 0.988 | D | 0.635 | neutral | None | None | None | None | I |
L/H | 0.2023 | likely_benign | 0.2342 | benign | -0.113 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
L/I | 0.089 | likely_benign | 0.097 | benign | -0.305 | Destabilizing | 0.015 | N | 0.232 | neutral | None | None | None | None | I |
L/K | 0.2234 | likely_benign | 0.2409 | benign | -0.484 | Destabilizing | 0.988 | D | 0.609 | neutral | None | None | None | None | I |
L/M | 0.1292 | likely_benign | 0.1354 | benign | -0.472 | Destabilizing | 0.984 | D | 0.457 | neutral | D | 0.532019394 | None | None | I |
L/N | 0.2882 | likely_benign | 0.3389 | benign | -0.385 | Destabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | I |
L/P | 0.1478 | likely_benign | 0.1715 | benign | -0.417 | Destabilizing | 0.995 | D | 0.638 | neutral | N | 0.520167605 | None | None | I |
L/Q | 0.1329 | likely_benign | 0.1428 | benign | -0.539 | Destabilizing | 0.995 | D | 0.613 | neutral | N | 0.505870156 | None | None | I |
L/R | 0.1733 | likely_benign | 0.1895 | benign | 0.038 | Stabilizing | 0.984 | D | 0.609 | neutral | N | 0.519588815 | None | None | I |
L/S | 0.1808 | likely_benign | 0.2132 | benign | -0.904 | Destabilizing | 0.988 | D | 0.575 | neutral | None | None | None | None | I |
L/T | 0.1814 | likely_benign | 0.2004 | benign | -0.842 | Destabilizing | 0.919 | D | 0.527 | neutral | None | None | None | None | I |
L/V | 0.0953 | likely_benign | 0.1008 | benign | -0.417 | Destabilizing | 0.026 | N | 0.273 | neutral | D | 0.528979089 | None | None | I |
L/W | 0.2632 | likely_benign | 0.3229 | benign | -0.553 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/Y | 0.3035 | likely_benign | 0.3592 | ambiguous | -0.32 | Destabilizing | 0.988 | D | 0.496 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.