Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5480 | 16663;16664;16665 | chr2:178732623;178732622;178732621 | chr2:179597350;179597349;179597348 |
N2AB | 5163 | 15712;15713;15714 | chr2:178732623;178732622;178732621 | chr2:179597350;179597349;179597348 |
N2A | 4236 | 12931;12932;12933 | chr2:178732623;178732622;178732621 | chr2:179597350;179597349;179597348 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs753485630 | -0.304 | 0.006 | N | 0.235 | 0.322 | 0.373173300195 | gnomAD-2.1.1 | 4.84E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 6.16385E-04 | None | 0 | None | 0 | 8.92E-06 | 0 |
T/K | rs753485630 | -0.304 | 0.006 | N | 0.235 | 0.322 | 0.373173300195 | gnomAD-4.0.0 | 1.27344E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.66713E-04 | None | 0 | 0 | 2.85871E-06 | 0 | 3.02535E-05 |
T/R | None | None | 0.473 | N | 0.541 | 0.328 | 0.487208542674 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0809 | likely_benign | 0.0808 | benign | -0.571 | Destabilizing | 0.01 | N | 0.105 | neutral | N | 0.503101997 | None | None | I |
T/C | 0.4357 | ambiguous | 0.4481 | ambiguous | -0.384 | Destabilizing | 0.995 | D | 0.495 | neutral | None | None | None | None | I |
T/D | 0.261 | likely_benign | 0.2932 | benign | 0.123 | Stabilizing | 0.543 | D | 0.487 | neutral | None | None | None | None | I |
T/E | 0.2104 | likely_benign | 0.2461 | benign | 0.097 | Stabilizing | 0.543 | D | 0.473 | neutral | None | None | None | None | I |
T/F | 0.1935 | likely_benign | 0.2148 | benign | -0.791 | Destabilizing | 0.893 | D | 0.565 | neutral | None | None | None | None | I |
T/G | 0.2441 | likely_benign | 0.2477 | benign | -0.789 | Destabilizing | 0.329 | N | 0.43 | neutral | None | None | None | None | I |
T/H | 0.1818 | likely_benign | 0.1922 | benign | -1.077 | Destabilizing | 0.944 | D | 0.551 | neutral | None | None | None | None | I |
T/I | 0.1373 | likely_benign | 0.159 | benign | -0.097 | Destabilizing | 0.473 | N | 0.538 | neutral | D | 0.534502339 | None | None | I |
T/K | 0.1728 | likely_benign | 0.1872 | benign | -0.572 | Destabilizing | 0.006 | N | 0.235 | neutral | N | 0.446939283 | None | None | I |
T/L | 0.0961 | likely_benign | 0.1063 | benign | -0.097 | Destabilizing | 0.329 | N | 0.424 | neutral | None | None | None | None | I |
T/M | 0.0871 | likely_benign | 0.095 | benign | 0.047 | Stabilizing | 0.176 | N | 0.304 | neutral | None | None | None | None | I |
T/N | 0.0982 | likely_benign | 0.0997 | benign | -0.435 | Destabilizing | 0.031 | N | 0.277 | neutral | None | None | None | None | I |
T/P | 0.3338 | likely_benign | 0.353 | ambiguous | -0.223 | Destabilizing | 0.784 | D | 0.565 | neutral | N | 0.500571489 | None | None | I |
T/Q | 0.1673 | likely_benign | 0.1801 | benign | -0.582 | Destabilizing | 0.893 | D | 0.565 | neutral | None | None | None | None | I |
T/R | 0.1415 | likely_benign | 0.1511 | benign | -0.362 | Destabilizing | 0.473 | N | 0.541 | neutral | N | 0.482630724 | None | None | I |
T/S | 0.094 | likely_benign | 0.0936 | benign | -0.695 | Destabilizing | 0.023 | N | 0.131 | neutral | N | 0.446264492 | None | None | I |
T/V | 0.1154 | likely_benign | 0.1275 | benign | -0.223 | Destabilizing | 0.329 | N | 0.358 | neutral | None | None | None | None | I |
T/W | 0.4809 | ambiguous | 0.5254 | ambiguous | -0.766 | Destabilizing | 0.995 | D | 0.575 | neutral | None | None | None | None | I |
T/Y | 0.2176 | likely_benign | 0.2345 | benign | -0.509 | Destabilizing | 0.981 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.