Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5481 | 16666;16667;16668 | chr2:178732620;178732619;178732618 | chr2:179597347;179597346;179597345 |
N2AB | 5164 | 15715;15716;15717 | chr2:178732620;178732619;178732618 | chr2:179597347;179597346;179597345 |
N2A | 4237 | 12934;12935;12936 | chr2:178732620;178732619;178732618 | chr2:179597347;179597346;179597345 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.317 | N | 0.658 | 0.397 | 0.381239546501 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 5.65483E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4689 | ambiguous | 0.5305 | ambiguous | -2.16 | Highly Destabilizing | 0.035 | N | 0.61 | neutral | None | None | None | None | N |
I/C | 0.7859 | likely_pathogenic | 0.8174 | pathogenic | -1.393 | Destabilizing | 0.824 | D | 0.738 | prob.delet. | None | None | None | None | N |
I/D | 0.9335 | likely_pathogenic | 0.9626 | pathogenic | -1.734 | Destabilizing | 0.555 | D | 0.796 | deleterious | None | None | None | None | N |
I/E | 0.8579 | likely_pathogenic | 0.9116 | pathogenic | -1.586 | Destabilizing | 0.555 | D | 0.797 | deleterious | None | None | None | None | N |
I/F | 0.2021 | likely_benign | 0.2509 | benign | -1.283 | Destabilizing | 0.317 | N | 0.658 | neutral | N | 0.51394064 | None | None | N |
I/G | 0.8087 | likely_pathogenic | 0.8611 | pathogenic | -2.645 | Highly Destabilizing | 0.001 | N | 0.563 | neutral | None | None | None | None | N |
I/H | 0.8136 | likely_pathogenic | 0.8709 | pathogenic | -1.963 | Destabilizing | 0.935 | D | 0.835 | deleterious | None | None | None | None | N |
I/K | 0.7697 | likely_pathogenic | 0.855 | pathogenic | -1.5 | Destabilizing | 0.555 | D | 0.793 | deleterious | None | None | None | None | N |
I/L | 0.1514 | likely_benign | 0.1748 | benign | -0.813 | Destabilizing | 0.012 | N | 0.491 | neutral | N | 0.518018308 | None | None | N |
I/M | 0.1389 | likely_benign | 0.162 | benign | -0.688 | Destabilizing | 0.317 | N | 0.626 | neutral | N | 0.502340051 | None | None | N |
I/N | 0.653 | likely_pathogenic | 0.75 | pathogenic | -1.561 | Destabilizing | 0.484 | N | 0.83 | deleterious | D | 0.522597126 | None | None | N |
I/P | 0.864 | likely_pathogenic | 0.905 | pathogenic | -1.236 | Destabilizing | 0.555 | D | 0.833 | deleterious | None | None | None | None | N |
I/Q | 0.7605 | likely_pathogenic | 0.8323 | pathogenic | -1.528 | Destabilizing | 0.791 | D | 0.84 | deleterious | None | None | None | None | N |
I/R | 0.6818 | likely_pathogenic | 0.7876 | pathogenic | -1.147 | Destabilizing | 0.555 | D | 0.843 | deleterious | None | None | None | None | N |
I/S | 0.5354 | ambiguous | 0.5999 | pathogenic | -2.322 | Highly Destabilizing | 0.117 | N | 0.777 | deleterious | D | 0.540447892 | None | None | N |
I/T | 0.406 | ambiguous | 0.4761 | ambiguous | -2.032 | Highly Destabilizing | 0.062 | N | 0.704 | prob.neutral | N | 0.510733842 | None | None | N |
I/V | 0.0654 | likely_benign | 0.0699 | benign | -1.236 | Destabilizing | None | N | 0.221 | neutral | N | 0.408932681 | None | None | N |
I/W | 0.8528 | likely_pathogenic | 0.8971 | pathogenic | -1.531 | Destabilizing | 0.935 | D | 0.836 | deleterious | None | None | None | None | N |
I/Y | 0.6593 | likely_pathogenic | 0.7476 | pathogenic | -1.257 | Destabilizing | 0.555 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.