Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5486 | 16681;16682;16683 | chr2:178732605;178732604;178732603 | chr2:179597332;179597331;179597330 |
N2AB | 5169 | 15730;15731;15732 | chr2:178732605;178732604;178732603 | chr2:179597332;179597331;179597330 |
N2A | 4242 | 12949;12950;12951 | chr2:178732605;178732604;178732603 | chr2:179597332;179597331;179597330 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.003 | N | 0.32 | 0.128 | 0.0920862733494 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
G/S | rs1430669284 | -0.391 | 0.338 | N | 0.492 | 0.298 | 0.159798565429 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/S | rs1430669284 | -0.391 | 0.338 | N | 0.492 | 0.298 | 0.159798565429 | gnomAD-4.0.0 | 1.36856E-06 | None | None | None | None | N | None | 0 | 2.23754E-05 | None | 0 | 0 | None | 0 | 0 | 8.99509E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1866 | likely_benign | 0.2017 | benign | -0.408 | Destabilizing | 0.013 | N | 0.278 | neutral | N | 0.461910312 | None | None | N |
G/C | 0.3482 | ambiguous | 0.3695 | ambiguous | -0.84 | Destabilizing | 0.988 | D | 0.703 | prob.neutral | N | 0.502513369 | None | None | N |
G/D | 0.0851 | likely_benign | 0.092 | benign | -0.38 | Destabilizing | 0.003 | N | 0.32 | neutral | N | 0.415396427 | None | None | N |
G/E | 0.1412 | likely_benign | 0.1439 | benign | -0.496 | Destabilizing | 0.018 | N | 0.341 | neutral | None | None | None | None | N |
G/F | 0.6865 | likely_pathogenic | 0.745 | pathogenic | -0.882 | Destabilizing | 0.967 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/H | 0.4118 | ambiguous | 0.4525 | ambiguous | -0.81 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
G/I | 0.532 | ambiguous | 0.589 | pathogenic | -0.29 | Destabilizing | 0.906 | D | 0.683 | prob.neutral | None | None | None | None | N |
G/K | 0.43 | ambiguous | 0.4855 | ambiguous | -0.908 | Destabilizing | 0.575 | D | 0.597 | neutral | None | None | None | None | N |
G/L | 0.533 | ambiguous | 0.5785 | pathogenic | -0.29 | Destabilizing | 0.826 | D | 0.637 | neutral | None | None | None | None | N |
G/M | 0.5841 | likely_pathogenic | 0.6359 | pathogenic | -0.353 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
G/N | 0.1581 | likely_benign | 0.1741 | benign | -0.552 | Destabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | N |
G/P | 0.9147 | likely_pathogenic | 0.9353 | pathogenic | -0.29 | Destabilizing | 0.906 | D | 0.64 | neutral | None | None | None | None | N |
G/Q | 0.2978 | likely_benign | 0.3209 | benign | -0.764 | Destabilizing | 0.826 | D | 0.637 | neutral | None | None | None | None | N |
G/R | 0.3512 | ambiguous | 0.4034 | ambiguous | -0.573 | Destabilizing | 0.782 | D | 0.639 | neutral | N | 0.465455485 | None | None | N |
G/S | 0.1364 | likely_benign | 0.142 | benign | -0.808 | Destabilizing | 0.338 | N | 0.492 | neutral | N | 0.464695016 | None | None | N |
G/T | 0.3424 | ambiguous | 0.3684 | ambiguous | -0.838 | Destabilizing | 0.575 | D | 0.59 | neutral | None | None | None | None | N |
G/V | 0.3676 | ambiguous | 0.4084 | ambiguous | -0.29 | Destabilizing | 0.782 | D | 0.626 | neutral | N | 0.456670073 | None | None | N |
G/W | 0.4934 | ambiguous | 0.5341 | ambiguous | -1.124 | Destabilizing | 0.991 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/Y | 0.4406 | ambiguous | 0.5116 | ambiguous | -0.735 | Destabilizing | 0.967 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.