Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5487 | 16684;16685;16686 | chr2:178732602;178732601;178732600 | chr2:179597329;179597328;179597327 |
N2AB | 5170 | 15733;15734;15735 | chr2:178732602;178732601;178732600 | chr2:179597329;179597328;179597327 |
N2A | 4243 | 12952;12953;12954 | chr2:178732602;178732601;178732600 | chr2:179597329;179597328;179597327 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.083 | 0.053 | 0.0482279557977 | gnomAD-4.0.0 | 6.8426E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
N/H | rs2080751190 | None | 0.065 | N | 0.247 | 0.062 | 0.0806252709748 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/H | rs2080751190 | None | 0.065 | N | 0.247 | 0.062 | 0.0806252709748 | gnomAD-4.0.0 | 1.23951E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69528E-06 | 0 | 0 |
N/K | None | None | None | N | 0.088 | 0.119 | 0.0762999501168 | gnomAD-4.0.0 | 1.59156E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8586E-06 | 0 | 0 |
N/S | rs2080750786 | None | 0.003 | N | 0.196 | 0.07 | 0.0401082797425 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30976E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs2080750786 | None | 0.003 | N | 0.196 | 0.07 | 0.0401082797425 | gnomAD-4.0.0 | 3.84387E-06 | None | None | None | None | N | None | 0 | 3.39087E-05 | None | 0 | 0 | None | 0 | 0 | 2.39329E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1327 | likely_benign | 0.1561 | benign | -0.078 | Destabilizing | 0.002 | N | 0.227 | neutral | None | None | None | None | N |
N/C | 0.2565 | likely_benign | 0.291 | benign | 0.025 | Stabilizing | 0.497 | N | 0.289 | neutral | None | None | None | None | N |
N/D | 0.0575 | likely_benign | 0.0641 | benign | 0.156 | Stabilizing | None | N | 0.083 | neutral | N | 0.43748664 | None | None | N |
N/E | 0.1179 | likely_benign | 0.1451 | benign | 0.094 | Stabilizing | None | N | 0.085 | neutral | None | None | None | None | N |
N/F | 0.4104 | ambiguous | 0.488 | ambiguous | -0.742 | Destabilizing | 0.022 | N | 0.395 | neutral | None | None | None | None | N |
N/G | 0.1411 | likely_benign | 0.1704 | benign | -0.148 | Destabilizing | None | N | 0.083 | neutral | None | None | None | None | N |
N/H | 0.1111 | likely_benign | 0.1206 | benign | -0.128 | Destabilizing | 0.065 | N | 0.247 | neutral | N | 0.500154039 | None | None | N |
N/I | 0.1802 | likely_benign | 0.2087 | benign | 0.005 | Stabilizing | 0.007 | N | 0.291 | neutral | N | 0.453351937 | None | None | N |
N/K | 0.1285 | likely_benign | 0.1534 | benign | 0.113 | Stabilizing | None | N | 0.088 | neutral | N | 0.463211804 | None | None | N |
N/L | 0.1826 | likely_benign | 0.213 | benign | 0.005 | Stabilizing | 0.004 | N | 0.3 | neutral | None | None | None | None | N |
N/M | 0.2508 | likely_benign | 0.2884 | benign | -0.023 | Destabilizing | 0.245 | N | 0.275 | neutral | None | None | None | None | N |
N/P | 0.2995 | likely_benign | 0.3387 | benign | -0.001 | Destabilizing | 0.037 | N | 0.288 | neutral | None | None | None | None | N |
N/Q | 0.1493 | likely_benign | 0.1763 | benign | -0.281 | Destabilizing | 0.009 | N | 0.219 | neutral | None | None | None | None | N |
N/R | 0.1595 | likely_benign | 0.1929 | benign | 0.184 | Stabilizing | 0.009 | N | 0.207 | neutral | None | None | None | None | N |
N/S | 0.0703 | likely_benign | 0.0739 | benign | -0.092 | Destabilizing | 0.003 | N | 0.196 | neutral | N | 0.394890656 | None | None | N |
N/T | 0.1024 | likely_benign | 0.1146 | benign | -0.045 | Destabilizing | 0.006 | N | 0.211 | neutral | N | 0.499460606 | None | None | N |
N/V | 0.1638 | likely_benign | 0.1945 | benign | -0.001 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
N/W | 0.5744 | likely_pathogenic | 0.6392 | pathogenic | -0.908 | Destabilizing | 0.497 | N | 0.283 | neutral | None | None | None | None | N |
N/Y | 0.1484 | likely_benign | 0.167 | benign | -0.564 | Destabilizing | None | N | 0.15 | neutral | N | 0.461492239 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.