Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5504 | 16735;16736;16737 | chr2:178732551;178732550;178732549 | chr2:179597278;179597277;179597276 |
N2AB | 5187 | 15784;15785;15786 | chr2:178732551;178732550;178732549 | chr2:179597278;179597277;179597276 |
N2A | 4260 | 13003;13004;13005 | chr2:178732551;178732550;178732549 | chr2:179597278;179597277;179597276 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.625 | N | 0.423 | 0.102 | 0.247872288689 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/G | rs1038822352 | None | 0.454 | N | 0.565 | 0.275 | 0.391470661076 | gnomAD-4.0.0 | 6.84267E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
E/K | rs2080741049 | None | 0.801 | N | 0.434 | 0.25 | 0.252162846088 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
E/K | rs2080741049 | None | 0.801 | N | 0.434 | 0.25 | 0.252162846088 | gnomAD-4.0.0 | 6.57315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.42507E-05 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.891 | N | 0.463 | 0.222 | 0.208000267992 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/V | rs1038822352 | -0.05 | 0.669 | N | 0.599 | 0.315 | 0.508223314113 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs1038822352 | -0.05 | 0.669 | N | 0.599 | 0.315 | 0.508223314113 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs1038822352 | -0.05 | 0.669 | N | 0.599 | 0.315 | 0.508223314113 | gnomAD-4.0.0 | 4.95802E-06 | None | None | None | None | N | None | 9.34405E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60143E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1181 | likely_benign | 0.1222 | benign | -1.287 | Destabilizing | 0.005 | N | 0.193 | neutral | N | 0.451827814 | None | None | N |
E/C | 0.7337 | likely_pathogenic | 0.7477 | pathogenic | -0.613 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
E/D | 0.172 | likely_benign | 0.1905 | benign | -1.168 | Destabilizing | 0.625 | D | 0.423 | neutral | N | 0.434146131 | None | None | N |
E/F | 0.5931 | likely_pathogenic | 0.6326 | pathogenic | -1.001 | Destabilizing | 0.016 | N | 0.47 | neutral | None | None | None | None | N |
E/G | 0.1343 | likely_benign | 0.1467 | benign | -1.627 | Destabilizing | 0.454 | N | 0.565 | neutral | N | 0.421814338 | None | None | N |
E/H | 0.3327 | likely_benign | 0.3505 | ambiguous | -1.221 | Destabilizing | 0.991 | D | 0.501 | neutral | None | None | None | None | N |
E/I | 0.281 | likely_benign | 0.3098 | benign | -0.352 | Destabilizing | 0.949 | D | 0.647 | neutral | None | None | None | None | N |
E/K | 0.1416 | likely_benign | 0.1555 | benign | -0.657 | Destabilizing | 0.801 | D | 0.434 | neutral | N | 0.435511567 | None | None | N |
E/L | 0.3074 | likely_benign | 0.3439 | ambiguous | -0.352 | Destabilizing | 0.728 | D | 0.587 | neutral | None | None | None | None | N |
E/M | 0.3883 | ambiguous | 0.4151 | ambiguous | 0.242 | Stabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | N |
E/N | 0.2539 | likely_benign | 0.2774 | benign | -1.031 | Destabilizing | 0.842 | D | 0.465 | neutral | None | None | None | None | N |
E/P | 0.815 | likely_pathogenic | 0.8577 | pathogenic | -0.645 | Destabilizing | 0.974 | D | 0.566 | neutral | None | None | None | None | N |
E/Q | 0.1026 | likely_benign | 0.102 | benign | -0.952 | Destabilizing | 0.891 | D | 0.463 | neutral | N | 0.442573613 | None | None | N |
E/R | 0.208 | likely_benign | 0.2216 | benign | -0.501 | Destabilizing | 0.949 | D | 0.493 | neutral | None | None | None | None | N |
E/S | 0.1583 | likely_benign | 0.1663 | benign | -1.442 | Destabilizing | 0.029 | N | 0.108 | neutral | None | None | None | None | N |
E/T | 0.1707 | likely_benign | 0.1796 | benign | -1.14 | Destabilizing | 0.728 | D | 0.498 | neutral | None | None | None | None | N |
E/V | 0.1613 | likely_benign | 0.176 | benign | -0.645 | Destabilizing | 0.669 | D | 0.599 | neutral | N | 0.37234831 | None | None | N |
E/W | 0.8013 | likely_pathogenic | 0.8302 | pathogenic | -0.745 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
E/Y | 0.4962 | ambiguous | 0.528 | ambiguous | -0.714 | Destabilizing | 0.904 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.