Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5512 | 16759;16760;16761 | chr2:178732527;178732526;178732525 | chr2:179597254;179597253;179597252 |
N2AB | 5195 | 15808;15809;15810 | chr2:178732527;178732526;178732525 | chr2:179597254;179597253;179597252 |
N2A | 4268 | 13027;13028;13029 | chr2:178732527;178732526;178732525 | chr2:179597254;179597253;179597252 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.962 | N | 0.497 | 0.364 | 0.645824608598 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2598 | likely_benign | 0.267 | benign | -2.069 | Highly Destabilizing | 0.996 | D | 0.507 | neutral | D | 0.528557801 | None | None | N |
V/C | 0.8572 | likely_pathogenic | 0.8536 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/D | 0.9502 | likely_pathogenic | 0.9604 | pathogenic | -2.292 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
V/E | 0.8889 | likely_pathogenic | 0.9074 | pathogenic | -2.164 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | D | 0.565135512 | None | None | N |
V/F | 0.6685 | likely_pathogenic | 0.704 | pathogenic | -1.404 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/G | 0.4725 | ambiguous | 0.5011 | ambiguous | -2.516 | Highly Destabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.547031257 | None | None | N |
V/H | 0.9739 | likely_pathogenic | 0.9785 | pathogenic | -2.04 | Highly Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/I | 0.1176 | likely_benign | 0.1232 | benign | -0.867 | Destabilizing | 0.962 | D | 0.497 | neutral | N | 0.494521555 | None | None | N |
V/K | 0.9362 | likely_pathogenic | 0.9521 | pathogenic | -1.678 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/L | 0.346 | ambiguous | 0.3596 | ambiguous | -0.867 | Destabilizing | 0.275 | N | 0.302 | neutral | D | 0.539932375 | None | None | N |
V/M | 0.4097 | ambiguous | 0.4427 | ambiguous | -0.991 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
V/N | 0.8651 | likely_pathogenic | 0.8861 | pathogenic | -1.798 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/P | 0.7316 | likely_pathogenic | 0.7718 | pathogenic | -1.238 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/Q | 0.8853 | likely_pathogenic | 0.9008 | pathogenic | -1.809 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/R | 0.9045 | likely_pathogenic | 0.9207 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
V/S | 0.5694 | likely_pathogenic | 0.5813 | pathogenic | -2.464 | Highly Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/T | 0.3783 | ambiguous | 0.3939 | ambiguous | -2.203 | Highly Destabilizing | 0.997 | D | 0.625 | neutral | None | None | None | None | N |
V/W | 0.9855 | likely_pathogenic | 0.9884 | pathogenic | -1.71 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/Y | 0.9614 | likely_pathogenic | 0.9663 | pathogenic | -1.395 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.