Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5523 | 16792;16793;16794 | chr2:178732494;178732493;178732492 | chr2:179597221;179597220;179597219 |
N2AB | 5206 | 15841;15842;15843 | chr2:178732494;178732493;178732492 | chr2:179597221;179597220;179597219 |
N2A | 4279 | 13060;13061;13062 | chr2:178732494;178732493;178732492 | chr2:179597221;179597220;179597219 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs755764408 | -0.569 | 0.055 | N | 0.545 | 0.199 | 0.276898752692 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
K/E | rs755764408 | -0.569 | 0.055 | N | 0.545 | 0.199 | 0.276898752692 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2737 | likely_benign | 0.2936 | benign | -1.093 | Destabilizing | 0.157 | N | 0.639 | neutral | None | None | None | None | N |
K/C | 0.5972 | likely_pathogenic | 0.6129 | pathogenic | -1.177 | Destabilizing | 0.968 | D | 0.744 | deleterious | None | None | None | None | N |
K/D | 0.6276 | likely_pathogenic | 0.6684 | pathogenic | -0.83 | Destabilizing | 0.272 | N | 0.653 | neutral | None | None | None | None | N |
K/E | 0.1244 | likely_benign | 0.1396 | benign | -0.616 | Destabilizing | 0.055 | N | 0.545 | neutral | N | 0.455137478 | None | None | N |
K/F | 0.6058 | likely_pathogenic | 0.6172 | pathogenic | -0.45 | Destabilizing | 0.89 | D | 0.767 | deleterious | None | None | None | None | N |
K/G | 0.5462 | ambiguous | 0.5748 | pathogenic | -1.542 | Destabilizing | 0.272 | N | 0.722 | prob.delet. | None | None | None | None | N |
K/H | 0.2285 | likely_benign | 0.2362 | benign | -1.714 | Destabilizing | 0.567 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/I | 0.1959 | likely_benign | 0.2061 | benign | 0.135 | Stabilizing | 0.667 | D | 0.769 | deleterious | N | 0.440285456 | None | None | N |
K/L | 0.2405 | likely_benign | 0.249 | benign | 0.135 | Stabilizing | 0.272 | N | 0.722 | prob.delet. | None | None | None | None | N |
K/M | 0.139 | likely_benign | 0.1442 | benign | -0.133 | Destabilizing | 0.726 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/N | 0.3878 | ambiguous | 0.4219 | ambiguous | -1.205 | Destabilizing | 0.22 | N | 0.572 | neutral | N | 0.501525916 | None | None | N |
K/P | 0.9701 | likely_pathogenic | 0.9744 | pathogenic | -0.248 | Destabilizing | 0.726 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/Q | 0.0969 | likely_benign | 0.0996 | benign | -1.072 | Destabilizing | None | N | 0.343 | neutral | N | 0.435146208 | None | None | N |
K/R | 0.075 | likely_benign | 0.0743 | benign | -0.946 | Destabilizing | 0.124 | N | 0.532 | neutral | N | 0.45001966 | None | None | N |
K/S | 0.3261 | likely_benign | 0.347 | ambiguous | -1.871 | Destabilizing | 0.157 | N | 0.562 | neutral | None | None | None | None | N |
K/T | 0.1143 | likely_benign | 0.12 | benign | -1.415 | Destabilizing | 0.22 | N | 0.673 | neutral | N | 0.442496255 | None | None | N |
K/V | 0.1846 | likely_benign | 0.1947 | benign | -0.248 | Destabilizing | 0.567 | D | 0.765 | deleterious | None | None | None | None | N |
K/W | 0.669 | likely_pathogenic | 0.687 | pathogenic | -0.369 | Destabilizing | 0.968 | D | 0.748 | deleterious | None | None | None | None | N |
K/Y | 0.5163 | ambiguous | 0.5367 | ambiguous | -0.056 | Destabilizing | 0.726 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.