Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5536 | 16831;16832;16833 | chr2:178732455;178732454;178732453 | chr2:179597182;179597181;179597180 |
N2AB | 5219 | 15880;15881;15882 | chr2:178732455;178732454;178732453 | chr2:179597182;179597181;179597180 |
N2A | 4292 | 13099;13100;13101 | chr2:178732455;178732454;178732453 | chr2:179597182;179597181;179597180 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1386348152 | 0.491 | None | N | 0.161 | 0.121 | 0.168933306366 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
N/K | rs1386348152 | 0.491 | None | N | 0.161 | 0.121 | 0.168933306366 | gnomAD-4.0.0 | 1.60937E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78458E-05 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs1380672169 | -0.175 | 0.012 | N | 0.347 | 0.099 | 0.193865811164 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 2.95E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/S | rs1380672169 | -0.175 | 0.012 | N | 0.347 | 0.099 | 0.193865811164 | gnomAD-4.0.0 | 1.6095E-06 | None | None | None | None | N | None | 0 | 2.32288E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1318 | likely_benign | 0.1557 | benign | -0.708 | Destabilizing | None | N | 0.289 | neutral | None | None | None | None | N |
N/C | 0.2664 | likely_benign | 0.2928 | benign | 0.175 | Stabilizing | 0.864 | D | 0.522 | neutral | None | None | None | None | N |
N/D | 0.0807 | likely_benign | 0.1046 | benign | -0.254 | Destabilizing | None | N | 0.155 | neutral | N | 0.461716734 | None | None | N |
N/E | 0.1947 | likely_benign | 0.242 | benign | -0.272 | Destabilizing | 0.016 | N | 0.381 | neutral | None | None | None | None | N |
N/F | 0.3195 | likely_benign | 0.3715 | ambiguous | -1.043 | Destabilizing | 0.214 | N | 0.561 | neutral | None | None | None | None | N |
N/G | 0.2243 | likely_benign | 0.2626 | benign | -0.897 | Destabilizing | 0.016 | N | 0.35 | neutral | None | None | None | None | N |
N/H | 0.0792 | likely_benign | 0.0829 | benign | -0.944 | Destabilizing | 0.295 | N | 0.529 | neutral | N | 0.394627737 | None | None | N |
N/I | 0.1368 | likely_benign | 0.153 | benign | -0.283 | Destabilizing | 0.029 | N | 0.517 | neutral | N | 0.470048216 | None | None | N |
N/K | 0.1585 | likely_benign | 0.1854 | benign | 0.062 | Stabilizing | None | N | 0.161 | neutral | N | 0.435548853 | None | None | N |
N/L | 0.1533 | likely_benign | 0.17 | benign | -0.283 | Destabilizing | None | N | 0.381 | neutral | None | None | None | None | N |
N/M | 0.2323 | likely_benign | 0.25 | benign | 0.358 | Stabilizing | 0.214 | N | 0.542 | neutral | None | None | None | None | N |
N/P | 0.3429 | ambiguous | 0.4067 | ambiguous | -0.399 | Destabilizing | 0.136 | N | 0.589 | neutral | None | None | None | None | N |
N/Q | 0.1821 | likely_benign | 0.2081 | benign | -0.616 | Destabilizing | 0.038 | N | 0.491 | neutral | None | None | None | None | N |
N/R | 0.1678 | likely_benign | 0.1896 | benign | 0.18 | Stabilizing | 0.038 | N | 0.385 | neutral | None | None | None | None | N |
N/S | 0.0676 | likely_benign | 0.0702 | benign | -0.339 | Destabilizing | 0.012 | N | 0.347 | neutral | N | 0.408188893 | None | None | N |
N/T | 0.0922 | likely_benign | 0.0969 | benign | -0.202 | Destabilizing | None | N | 0.143 | neutral | N | 0.41301871 | None | None | N |
N/V | 0.1264 | likely_benign | 0.1386 | benign | -0.399 | Destabilizing | 0.001 | N | 0.383 | neutral | None | None | None | None | N |
N/W | 0.5982 | likely_pathogenic | 0.6562 | pathogenic | -0.893 | Destabilizing | 0.864 | D | 0.542 | neutral | None | None | None | None | N |
N/Y | 0.1127 | likely_benign | 0.1273 | benign | -0.654 | Destabilizing | 0.295 | N | 0.551 | neutral | N | 0.453964042 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.