Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5547 | 16864;16865;16866 | chr2:178732330;178732329;178732328 | chr2:179597057;179597056;179597055 |
N2AB | 5230 | 15913;15914;15915 | chr2:178732330;178732329;178732328 | chr2:179597057;179597056;179597055 |
N2A | 4303 | 13132;13133;13134 | chr2:178732330;178732329;178732328 | chr2:179597057;179597056;179597055 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs766334270 | 0.154 | 0.064 | N | 0.184 | 0.226 | 0.156986980423 | gnomAD-2.1.1 | 4.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.57E-05 | None | 0 | 0 | 0 |
E/K | rs766334270 | 0.154 | 0.064 | N | 0.184 | 0.226 | 0.156986980423 | gnomAD-4.0.0 | 6.89766E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.18433E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.159 | likely_benign | 0.16 | benign | -0.458 | Destabilizing | 0.679 | D | 0.357 | neutral | N | 0.490070331 | None | None | N |
E/C | 0.7633 | likely_pathogenic | 0.7803 | pathogenic | -0.227 | Destabilizing | 0.998 | D | 0.347 | neutral | None | None | None | None | N |
E/D | 0.1366 | likely_benign | 0.1424 | benign | -0.466 | Destabilizing | 0.514 | D | 0.326 | neutral | N | 0.47793054 | None | None | N |
E/F | 0.7087 | likely_pathogenic | 0.7147 | pathogenic | -0.22 | Destabilizing | 0.96 | D | 0.381 | neutral | None | None | None | None | N |
E/G | 0.1443 | likely_benign | 0.1426 | benign | -0.678 | Destabilizing | 0.837 | D | 0.376 | neutral | N | 0.504154349 | None | None | N |
E/H | 0.3342 | likely_benign | 0.3556 | ambiguous | 0.06 | Stabilizing | 0.98 | D | 0.373 | neutral | None | None | None | None | N |
E/I | 0.3724 | ambiguous | 0.3715 | ambiguous | 0.094 | Stabilizing | 0.923 | D | 0.404 | neutral | None | None | None | None | N |
E/K | 0.1071 | likely_benign | 0.1076 | benign | 0.131 | Stabilizing | 0.064 | N | 0.184 | neutral | N | 0.359217858 | None | None | N |
E/L | 0.3538 | ambiguous | 0.3594 | ambiguous | 0.094 | Stabilizing | 0.584 | D | 0.364 | neutral | None | None | None | None | N |
E/M | 0.428 | ambiguous | 0.4297 | ambiguous | 0.137 | Stabilizing | 0.38 | N | 0.324 | neutral | None | None | None | None | N |
E/N | 0.2384 | likely_benign | 0.2481 | benign | -0.246 | Destabilizing | 0.083 | N | 0.163 | neutral | None | None | None | None | N |
E/P | 0.7822 | likely_pathogenic | 0.7677 | pathogenic | -0.07 | Destabilizing | 0.993 | D | 0.429 | neutral | None | None | None | None | N |
E/Q | 0.1027 | likely_benign | 0.1042 | benign | -0.2 | Destabilizing | 0.837 | D | 0.299 | neutral | N | 0.402200631 | None | None | N |
E/R | 0.1711 | likely_benign | 0.1719 | benign | 0.443 | Stabilizing | 0.021 | N | 0.198 | neutral | None | None | None | None | N |
E/S | 0.1819 | likely_benign | 0.1847 | benign | -0.419 | Destabilizing | 0.584 | D | 0.309 | neutral | None | None | None | None | N |
E/T | 0.1942 | likely_benign | 0.1991 | benign | -0.241 | Destabilizing | 0.083 | N | 0.181 | neutral | None | None | None | None | N |
E/V | 0.207 | likely_benign | 0.2046 | benign | -0.07 | Destabilizing | 0.719 | D | 0.367 | neutral | N | 0.44933843 | None | None | N |
E/W | 0.7983 | likely_pathogenic | 0.8064 | pathogenic | -0.032 | Destabilizing | 0.998 | D | 0.36 | neutral | None | None | None | None | N |
E/Y | 0.5425 | ambiguous | 0.5541 | ambiguous | 0.027 | Stabilizing | 0.993 | D | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.