Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5554 | 16885;16886;16887 | chr2:178732309;178732308;178732307 | chr2:179597036;179597035;179597034 |
N2AB | 5237 | 15934;15935;15936 | chr2:178732309;178732308;178732307 | chr2:179597036;179597035;179597034 |
N2A | 4310 | 13153;13154;13155 | chr2:178732309;178732308;178732307 | chr2:179597036;179597035;179597034 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs2080687572 | None | 1.0 | N | 0.605 | 0.228 | 0.352693368174 | gnomAD-4.0.0 | 1.59845E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44005E-05 | 0 |
L/V | None | None | 0.999 | N | 0.508 | 0.229 | 0.241664281697 | gnomAD-4.0.0 | 1.59846E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.42601E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2869 | likely_benign | 0.2838 | benign | -0.954 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
L/C | 0.4255 | ambiguous | 0.4149 | ambiguous | -0.803 | Destabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | I |
L/D | 0.5788 | likely_pathogenic | 0.5633 | ambiguous | -0.307 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
L/E | 0.3145 | likely_benign | 0.297 | benign | -0.339 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
L/F | 0.1101 | likely_benign | 0.1034 | benign | -0.616 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
L/G | 0.5045 | ambiguous | 0.5043 | ambiguous | -1.196 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
L/H | 0.1764 | likely_benign | 0.1663 | benign | -0.318 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
L/I | 0.0771 | likely_benign | 0.0707 | benign | -0.402 | Destabilizing | 0.999 | D | 0.473 | neutral | None | None | None | None | I |
L/K | 0.2451 | likely_benign | 0.2238 | benign | -0.67 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
L/M | 0.1116 | likely_benign | 0.1138 | benign | -0.504 | Destabilizing | 1.0 | D | 0.605 | neutral | N | 0.520975681 | None | None | I |
L/N | 0.3136 | likely_benign | 0.3043 | benign | -0.584 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
L/P | 0.3545 | ambiguous | 0.3451 | ambiguous | -0.553 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.494264385 | None | None | I |
L/Q | 0.1436 | likely_benign | 0.1382 | benign | -0.73 | Destabilizing | 1.0 | D | 0.654 | neutral | N | 0.481387142 | None | None | I |
L/R | 0.1679 | likely_benign | 0.1834 | benign | -0.119 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | N | 0.494885158 | None | None | I |
L/S | 0.2906 | likely_benign | 0.2786 | benign | -1.115 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
L/T | 0.2232 | likely_benign | 0.2126 | benign | -1.03 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | I |
L/V | 0.086 | likely_benign | 0.0819 | benign | -0.553 | Destabilizing | 0.999 | D | 0.508 | neutral | N | 0.413786714 | None | None | I |
L/W | 0.1929 | likely_benign | 0.1913 | benign | -0.66 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
L/Y | 0.2352 | likely_benign | 0.2262 | benign | -0.433 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.