Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC555416885;16886;16887 chr2:178732309;178732308;178732307chr2:179597036;179597035;179597034
N2AB523715934;15935;15936 chr2:178732309;178732308;178732307chr2:179597036;179597035;179597034
N2A431013153;13154;13155 chr2:178732309;178732308;178732307chr2:179597036;179597035;179597034
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Ig-39
  • Domain position: 12
  • Structural Position: 16
  • Q(SASA): 0.6811
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/M rs2080687572 None 1.0 N 0.605 0.228 0.352693368174 gnomAD-4.0.0 1.59845E-06 None None None None I None 0 0 None 0 0 None 0 0 0 1.44005E-05 0
L/V None None 0.999 N 0.508 0.229 0.241664281697 gnomAD-4.0.0 1.59846E-06 None None None None I None 0 0 None 0 0 None 0 2.42601E-04 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2869 likely_benign 0.2838 benign -0.954 Destabilizing 0.999 D 0.639 neutral None None None None I
L/C 0.4255 ambiguous 0.4149 ambiguous -0.803 Destabilizing 1.0 D 0.569 neutral None None None None I
L/D 0.5788 likely_pathogenic 0.5633 ambiguous -0.307 Destabilizing 1.0 D 0.664 neutral None None None None I
L/E 0.3145 likely_benign 0.297 benign -0.339 Destabilizing 1.0 D 0.693 prob.neutral None None None None I
L/F 0.1101 likely_benign 0.1034 benign -0.616 Destabilizing 1.0 D 0.617 neutral None None None None I
L/G 0.5045 ambiguous 0.5043 ambiguous -1.196 Destabilizing 1.0 D 0.69 prob.neutral None None None None I
L/H 0.1764 likely_benign 0.1663 benign -0.318 Destabilizing 1.0 D 0.678 prob.neutral None None None None I
L/I 0.0771 likely_benign 0.0707 benign -0.402 Destabilizing 0.999 D 0.473 neutral None None None None I
L/K 0.2451 likely_benign 0.2238 benign -0.67 Destabilizing 1.0 D 0.664 neutral None None None None I
L/M 0.1116 likely_benign 0.1138 benign -0.504 Destabilizing 1.0 D 0.605 neutral N 0.520975681 None None I
L/N 0.3136 likely_benign 0.3043 benign -0.584 Destabilizing 1.0 D 0.666 neutral None None None None I
L/P 0.3545 ambiguous 0.3451 ambiguous -0.553 Destabilizing 1.0 D 0.671 neutral N 0.494264385 None None I
L/Q 0.1436 likely_benign 0.1382 benign -0.73 Destabilizing 1.0 D 0.654 neutral N 0.481387142 None None I
L/R 0.1679 likely_benign 0.1834 benign -0.119 Destabilizing 1.0 D 0.68 prob.neutral N 0.494885158 None None I
L/S 0.2906 likely_benign 0.2786 benign -1.115 Destabilizing 1.0 D 0.659 neutral None None None None I
L/T 0.2232 likely_benign 0.2126 benign -1.03 Destabilizing 1.0 D 0.652 neutral None None None None I
L/V 0.086 likely_benign 0.0819 benign -0.553 Destabilizing 0.999 D 0.508 neutral N 0.413786714 None None I
L/W 0.1929 likely_benign 0.1913 benign -0.66 Destabilizing 1.0 D 0.67 neutral None None None None I
L/Y 0.2352 likely_benign 0.2262 benign -0.433 Destabilizing 1.0 D 0.628 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.