Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5573 | 16942;16943;16944 | chr2:178732252;178732251;178732250 | chr2:179596979;179596978;179596977 |
N2AB | 5256 | 15991;15992;15993 | chr2:178732252;178732251;178732250 | chr2:179596979;179596978;179596977 |
N2A | 4329 | 13210;13211;13212 | chr2:178732252;178732251;178732250 | chr2:179596979;179596978;179596977 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.998 | N | 0.685 | 0.5 | 0.895925552087 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7554 | likely_pathogenic | 0.8125 | pathogenic | -2.161 | Highly Destabilizing | 0.992 | D | 0.485 | neutral | None | None | None | None | N |
I/C | 0.9191 | likely_pathogenic | 0.9398 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
I/D | 0.9837 | likely_pathogenic | 0.9871 | pathogenic | -1.756 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
I/E | 0.9408 | likely_pathogenic | 0.9497 | pathogenic | -1.634 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
I/F | 0.5216 | ambiguous | 0.5467 | ambiguous | -1.37 | Destabilizing | 0.998 | D | 0.631 | neutral | N | 0.490567855 | None | None | N |
I/G | 0.942 | likely_pathogenic | 0.9588 | pathogenic | -2.617 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
I/H | 0.9483 | likely_pathogenic | 0.959 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/K | 0.8675 | likely_pathogenic | 0.8903 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
I/L | 0.1677 | likely_benign | 0.1806 | benign | -0.911 | Destabilizing | 0.889 | D | 0.408 | neutral | N | 0.499442829 | None | None | N |
I/M | 0.1757 | likely_benign | 0.1926 | benign | -0.825 | Destabilizing | 0.998 | D | 0.603 | neutral | N | 0.501924161 | None | None | N |
I/N | 0.8474 | likely_pathogenic | 0.8712 | pathogenic | -1.597 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.528929186 | None | None | N |
I/P | 0.8244 | likely_pathogenic | 0.8705 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
I/Q | 0.8733 | likely_pathogenic | 0.8957 | pathogenic | -1.609 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
I/R | 0.8209 | likely_pathogenic | 0.8494 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
I/S | 0.8424 | likely_pathogenic | 0.88 | pathogenic | -2.329 | Highly Destabilizing | 0.998 | D | 0.685 | prob.neutral | N | 0.488922014 | None | None | N |
I/T | 0.8083 | likely_pathogenic | 0.8536 | pathogenic | -2.068 | Highly Destabilizing | 0.989 | D | 0.639 | neutral | N | 0.494188706 | None | None | N |
I/V | 0.1023 | likely_benign | 0.1087 | benign | -1.301 | Destabilizing | 0.333 | N | 0.204 | neutral | N | 0.481818443 | None | None | N |
I/W | 0.9629 | likely_pathogenic | 0.9686 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
I/Y | 0.8963 | likely_pathogenic | 0.9023 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.