Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5591 | 16996;16997;16998 | chr2:178732198;178732197;178732196 | chr2:179596925;179596924;179596923 |
N2AB | 5274 | 16045;16046;16047 | chr2:178732198;178732197;178732196 | chr2:179596925;179596924;179596923 |
N2A | 4347 | 13264;13265;13266 | chr2:178732198;178732197;178732196 | chr2:179596925;179596924;179596923 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs750316973 | -0.159 | 0.001 | N | 0.243 | 0.179 | 0.222439326576 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22643E-04 | None | 0 | None | 0 | 0 | 0 |
R/I | rs750316973 | -0.159 | 0.001 | N | 0.243 | 0.179 | 0.222439326576 | gnomAD-4.0.0 | 1.0263E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.00776E-04 | None | 0 | 0 | 9.89408E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1393 | likely_benign | 0.1544 | benign | -0.814 | Destabilizing | 0.007 | N | 0.189 | neutral | None | None | None | None | N |
R/C | 0.1733 | likely_benign | 0.1749 | benign | -0.744 | Destabilizing | 0.356 | N | 0.319 | neutral | None | None | None | None | N |
R/D | 0.3107 | likely_benign | 0.3414 | ambiguous | -0.146 | Destabilizing | 0.031 | N | 0.334 | neutral | None | None | None | None | N |
R/E | 0.1379 | likely_benign | 0.1544 | benign | -0.069 | Destabilizing | 0.007 | N | 0.167 | neutral | None | None | None | None | N |
R/F | 0.2725 | likely_benign | 0.2924 | benign | -0.954 | Destabilizing | 0.356 | N | 0.393 | neutral | None | None | None | None | N |
R/G | 0.1169 | likely_benign | 0.1297 | benign | -1.059 | Destabilizing | 0.024 | N | 0.331 | neutral | D | 0.534310338 | None | None | N |
R/H | 0.0912 | likely_benign | 0.0864 | benign | -1.313 | Destabilizing | 0.356 | N | 0.249 | neutral | None | None | None | None | N |
R/I | 0.1082 | likely_benign | 0.1116 | benign | -0.175 | Destabilizing | 0.001 | N | 0.243 | neutral | N | 0.485518653 | None | None | N |
R/K | 0.0622 | likely_benign | 0.0649 | benign | -0.797 | Destabilizing | None | N | 0.081 | neutral | N | 0.493826365 | None | None | N |
R/L | 0.1189 | likely_benign | 0.1265 | benign | -0.175 | Destabilizing | 0.007 | N | 0.258 | neutral | None | None | None | None | N |
R/M | 0.1078 | likely_benign | 0.1143 | benign | -0.294 | Destabilizing | 0.356 | N | 0.291 | neutral | None | None | None | None | N |
R/N | 0.2101 | likely_benign | 0.2337 | benign | -0.181 | Destabilizing | 0.031 | N | 0.211 | neutral | None | None | None | None | N |
R/P | 0.6492 | likely_pathogenic | 0.6807 | pathogenic | -0.369 | Destabilizing | 0.136 | N | 0.389 | neutral | None | None | None | None | N |
R/Q | 0.0717 | likely_benign | 0.0729 | benign | -0.494 | Destabilizing | 0.001 | N | 0.089 | neutral | None | None | None | None | N |
R/S | 0.1561 | likely_benign | 0.1762 | benign | -0.955 | Destabilizing | 0.012 | N | 0.271 | neutral | N | 0.493250362 | None | None | N |
R/T | 0.0818 | likely_benign | 0.0855 | benign | -0.724 | Destabilizing | None | N | 0.115 | neutral | N | 0.509643967 | None | None | N |
R/V | 0.1381 | likely_benign | 0.1493 | benign | -0.369 | Destabilizing | 0.016 | N | 0.309 | neutral | None | None | None | None | N |
R/W | 0.1359 | likely_benign | 0.137 | benign | -0.664 | Destabilizing | 0.864 | D | 0.326 | neutral | None | None | None | None | N |
R/Y | 0.2198 | likely_benign | 0.2328 | benign | -0.329 | Destabilizing | 0.356 | N | 0.39 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.