Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5598 | 17017;17018;17019 | chr2:178732177;178732176;178732175 | chr2:179596904;179596903;179596902 |
N2AB | 5281 | 16066;16067;16068 | chr2:178732177;178732176;178732175 | chr2:179596904;179596903;179596902 |
N2A | 4354 | 13285;13286;13287 | chr2:178732177;178732176;178732175 | chr2:179596904;179596903;179596902 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1407842307 | -1.188 | None | N | 0.088 | 0.154 | 0.0806252709748 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/A | rs1407842307 | -1.188 | None | N | 0.088 | 0.154 | 0.0806252709748 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79894E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0772 | likely_benign | 0.0777 | benign | -1.027 | Destabilizing | None | N | 0.088 | neutral | N | 0.497984178 | None | None | N |
T/C | 0.3208 | likely_benign | 0.3202 | benign | -0.659 | Destabilizing | 0.667 | D | 0.517 | neutral | None | None | None | None | N |
T/D | 0.2943 | likely_benign | 0.2848 | benign | -0.593 | Destabilizing | 0.055 | N | 0.465 | neutral | None | None | None | None | N |
T/E | 0.19 | likely_benign | 0.1755 | benign | -0.538 | Destabilizing | 0.002 | N | 0.165 | neutral | None | None | None | None | N |
T/F | 0.1614 | likely_benign | 0.1639 | benign | -0.938 | Destabilizing | 0.22 | N | 0.607 | neutral | None | None | None | None | N |
T/G | 0.2427 | likely_benign | 0.2375 | benign | -1.336 | Destabilizing | 0.055 | N | 0.473 | neutral | None | None | None | None | N |
T/H | 0.1771 | likely_benign | 0.1702 | benign | -1.605 | Destabilizing | 0.497 | N | 0.579 | neutral | None | None | None | None | N |
T/I | 0.0903 | likely_benign | 0.0906 | benign | -0.273 | Destabilizing | None | N | 0.154 | neutral | N | 0.43497285 | None | None | N |
T/K | 0.1184 | likely_benign | 0.112 | benign | -0.761 | Destabilizing | 0.055 | N | 0.453 | neutral | None | None | None | None | N |
T/L | 0.0767 | likely_benign | 0.0772 | benign | -0.273 | Destabilizing | None | N | 0.148 | neutral | None | None | None | None | N |
T/M | 0.0724 | likely_benign | 0.0716 | benign | -0.015 | Destabilizing | 0.497 | N | 0.521 | neutral | None | None | None | None | N |
T/N | 0.1136 | likely_benign | 0.1114 | benign | -0.869 | Destabilizing | 0.001 | N | 0.128 | neutral | N | 0.438821232 | None | None | N |
T/P | 0.3441 | ambiguous | 0.3648 | ambiguous | -0.492 | Destabilizing | 0.301 | N | 0.556 | neutral | N | 0.473704596 | None | None | N |
T/Q | 0.1547 | likely_benign | 0.144 | benign | -0.967 | Destabilizing | 0.22 | N | 0.564 | neutral | None | None | None | None | N |
T/R | 0.0895 | likely_benign | 0.0877 | benign | -0.647 | Destabilizing | 0.22 | N | 0.534 | neutral | None | None | None | None | N |
T/S | 0.1033 | likely_benign | 0.102 | benign | -1.156 | Destabilizing | 0.042 | N | 0.312 | neutral | N | 0.431297826 | None | None | N |
T/V | 0.08 | likely_benign | 0.0787 | benign | -0.492 | Destabilizing | None | N | 0.093 | neutral | None | None | None | None | N |
T/W | 0.4198 | ambiguous | 0.4134 | ambiguous | -0.889 | Destabilizing | 0.958 | D | 0.571 | neutral | None | None | None | None | N |
T/Y | 0.1856 | likely_benign | 0.1791 | benign | -0.635 | Destabilizing | 0.667 | D | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.