Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5602 | 17029;17030;17031 | chr2:178732165;178732164;178732163 | chr2:179596892;179596891;179596890 |
N2AB | 5285 | 16078;16079;16080 | chr2:178732165;178732164;178732163 | chr2:179596892;179596891;179596890 |
N2A | 4358 | 13297;13298;13299 | chr2:178732165;178732164;178732163 | chr2:179596892;179596891;179596890 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.012 | N | 0.44 | 0.31 | 0.441221003447 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1253 | likely_benign | 0.1511 | benign | -0.956 | Destabilizing | 0.016 | N | 0.352 | neutral | None | None | None | None | N |
R/C | 0.1068 | likely_benign | 0.1233 | benign | -0.893 | Destabilizing | 0.676 | D | 0.437 | neutral | None | None | None | None | N |
R/D | 0.2629 | likely_benign | 0.3161 | benign | -0.011 | Destabilizing | 0.016 | N | 0.443 | neutral | None | None | None | None | N |
R/E | 0.1317 | likely_benign | 0.1487 | benign | 0.1 | Stabilizing | None | N | 0.205 | neutral | None | None | None | None | N |
R/F | 0.1859 | likely_benign | 0.2039 | benign | -0.843 | Destabilizing | 0.356 | N | 0.454 | neutral | None | None | None | None | N |
R/G | 0.1153 | likely_benign | 0.1404 | benign | -1.248 | Destabilizing | 0.012 | N | 0.44 | neutral | N | 0.496736828 | None | None | N |
R/H | 0.0643 | likely_benign | 0.0646 | benign | -1.404 | Destabilizing | None | N | 0.21 | neutral | None | None | None | None | N |
R/I | 0.0858 | likely_benign | 0.0893 | benign | -0.174 | Destabilizing | 0.093 | N | 0.503 | neutral | N | 0.460620656 | None | None | N |
R/K | 0.0687 | likely_benign | 0.0747 | benign | -0.9 | Destabilizing | 0.012 | N | 0.377 | neutral | N | 0.470568291 | None | None | N |
R/L | 0.0851 | likely_benign | 0.093 | benign | -0.174 | Destabilizing | 0.038 | N | 0.496 | neutral | None | None | None | None | N |
R/M | 0.083 | likely_benign | 0.0887 | benign | -0.429 | Destabilizing | 0.356 | N | 0.465 | neutral | None | None | None | None | N |
R/N | 0.1701 | likely_benign | 0.1985 | benign | -0.278 | Destabilizing | 0.016 | N | 0.402 | neutral | None | None | None | None | N |
R/P | 0.7131 | likely_pathogenic | 0.7828 | pathogenic | -0.415 | Destabilizing | 0.072 | N | 0.507 | neutral | None | None | None | None | N |
R/Q | 0.0649 | likely_benign | 0.0682 | benign | -0.523 | Destabilizing | 0.072 | N | 0.413 | neutral | None | None | None | None | N |
R/S | 0.1228 | likely_benign | 0.1466 | benign | -1.145 | Destabilizing | None | N | 0.263 | neutral | N | 0.482054721 | None | None | N |
R/T | 0.0637 | likely_benign | 0.068 | benign | -0.859 | Destabilizing | None | N | 0.269 | neutral | N | 0.416443017 | None | None | N |
R/V | 0.1143 | likely_benign | 0.1284 | benign | -0.415 | Destabilizing | 0.038 | N | 0.495 | neutral | None | None | None | None | N |
R/W | 0.0906 | likely_benign | 0.0978 | benign | -0.447 | Destabilizing | 0.864 | D | 0.447 | neutral | None | None | None | None | N |
R/Y | 0.1402 | likely_benign | 0.1504 | benign | -0.167 | Destabilizing | 0.214 | N | 0.511 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.