Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5603 | 17032;17033;17034 | chr2:178732162;178732161;178732160 | chr2:179596889;179596888;179596887 |
N2AB | 5286 | 16081;16082;16083 | chr2:178732162;178732161;178732160 | chr2:179596889;179596888;179596887 |
N2A | 4359 | 13300;13301;13302 | chr2:178732162;178732161;178732160 | chr2:179596889;179596888;179596887 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs956272919 | -1.64 | 0.995 | N | 0.85 | 0.676 | 0.860091853005 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/R | rs956272919 | -1.64 | 0.995 | N | 0.85 | 0.676 | 0.860091853005 | gnomAD-4.0.0 | 6.81678E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32406E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6256 | likely_pathogenic | 0.6687 | pathogenic | -2.96 | Highly Destabilizing | 0.851 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/C | 0.6541 | likely_pathogenic | 0.6785 | pathogenic | -2.471 | Highly Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
L/D | 0.9416 | likely_pathogenic | 0.956 | pathogenic | -3.55 | Highly Destabilizing | 0.996 | D | 0.875 | deleterious | None | None | None | None | N |
L/E | 0.7679 | likely_pathogenic | 0.8127 | pathogenic | -3.286 | Highly Destabilizing | 0.988 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.1325 | likely_benign | 0.1474 | benign | -1.778 | Destabilizing | 0.988 | D | 0.753 | deleterious | None | None | None | None | N |
L/G | 0.8467 | likely_pathogenic | 0.8766 | pathogenic | -3.56 | Highly Destabilizing | 0.988 | D | 0.873 | deleterious | None | None | None | None | N |
L/H | 0.5099 | ambiguous | 0.5651 | pathogenic | -3.045 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
L/I | 0.0878 | likely_benign | 0.0897 | benign | -1.189 | Destabilizing | 0.06 | N | 0.275 | neutral | None | None | None | None | N |
L/K | 0.6499 | likely_pathogenic | 0.6973 | pathogenic | -2.425 | Highly Destabilizing | 0.988 | D | 0.859 | deleterious | None | None | None | None | N |
L/M | 0.1143 | likely_benign | 0.1209 | benign | -1.239 | Destabilizing | 0.984 | D | 0.708 | prob.delet. | N | 0.471896442 | None | None | N |
L/N | 0.7854 | likely_pathogenic | 0.822 | pathogenic | -2.908 | Highly Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
L/P | 0.9297 | likely_pathogenic | 0.9496 | pathogenic | -1.765 | Destabilizing | 0.995 | D | 0.873 | deleterious | N | 0.520552302 | None | None | N |
L/Q | 0.4495 | ambiguous | 0.5022 | ambiguous | -2.705 | Highly Destabilizing | 0.995 | D | 0.863 | deleterious | N | 0.520552302 | None | None | N |
L/R | 0.5395 | ambiguous | 0.592 | pathogenic | -2.158 | Highly Destabilizing | 0.995 | D | 0.85 | deleterious | N | 0.509195997 | None | None | N |
L/S | 0.7297 | likely_pathogenic | 0.7771 | pathogenic | -3.611 | Highly Destabilizing | 0.988 | D | 0.839 | deleterious | None | None | None | None | N |
L/T | 0.6144 | likely_pathogenic | 0.657 | pathogenic | -3.187 | Highly Destabilizing | 0.919 | D | 0.779 | deleterious | None | None | None | None | N |
L/V | 0.1206 | likely_benign | 0.1253 | benign | -1.765 | Destabilizing | 0.026 | N | 0.32 | neutral | N | 0.448075433 | None | None | N |
L/W | 0.3666 | ambiguous | 0.4114 | ambiguous | -2.225 | Highly Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
L/Y | 0.4607 | ambiguous | 0.5006 | ambiguous | -1.996 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.