Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5606 | 17041;17042;17043 | chr2:178732153;178732152;178732151 | chr2:179596880;179596879;179596878 |
N2AB | 5289 | 16090;16091;16092 | chr2:178732153;178732152;178732151 | chr2:179596880;179596879;179596878 |
N2A | 4362 | 13309;13310;13311 | chr2:178732153;178732152;178732151 | chr2:179596880;179596879;179596878 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1356962832 | -1.875 | 0.027 | N | 0.427 | 0.23 | 0.393316636838 | gnomAD-4.0.0 | 2.73687E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59795E-06 | 0 | 0 |
V/F | None | None | 0.317 | D | 0.624 | 0.212 | 0.557519804684 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1049 | likely_benign | 0.1026 | benign | -1.63 | Destabilizing | 0.027 | N | 0.427 | neutral | N | 0.443440404 | None | None | N |
V/C | 0.6308 | likely_pathogenic | 0.6357 | pathogenic | -2.261 | Highly Destabilizing | 0.001 | N | 0.346 | neutral | None | None | None | None | N |
V/D | 0.6047 | likely_pathogenic | 0.6322 | pathogenic | -3.073 | Highly Destabilizing | 0.317 | N | 0.637 | neutral | N | 0.509430395 | None | None | N |
V/E | 0.6159 | likely_pathogenic | 0.6166 | pathogenic | -3.008 | Highly Destabilizing | 0.38 | N | 0.622 | neutral | None | None | None | None | N |
V/F | 0.2364 | likely_benign | 0.2139 | benign | -1.344 | Destabilizing | 0.317 | N | 0.624 | neutral | D | 0.542474035 | None | None | N |
V/G | 0.2441 | likely_benign | 0.2478 | benign | -1.96 | Destabilizing | 0.117 | N | 0.612 | neutral | D | 0.535674952 | None | None | N |
V/H | 0.7443 | likely_pathogenic | 0.7431 | pathogenic | -1.42 | Destabilizing | 0.935 | D | 0.594 | neutral | None | None | None | None | N |
V/I | 0.0715 | likely_benign | 0.0675 | benign | -0.778 | Destabilizing | None | N | 0.183 | neutral | N | 0.482825512 | None | None | N |
V/K | 0.6954 | likely_pathogenic | 0.6925 | pathogenic | -1.604 | Destabilizing | 0.38 | N | 0.619 | neutral | None | None | None | None | N |
V/L | 0.1738 | likely_benign | 0.1556 | benign | -0.778 | Destabilizing | 0.009 | N | 0.401 | neutral | N | 0.441885753 | None | None | N |
V/M | 0.1502 | likely_benign | 0.1394 | benign | -1.061 | Destabilizing | 0.38 | N | 0.557 | neutral | None | None | None | None | N |
V/N | 0.393 | ambiguous | 0.3884 | ambiguous | -1.89 | Destabilizing | 0.38 | N | 0.641 | neutral | None | None | None | None | N |
V/P | 0.5287 | ambiguous | 0.5377 | ambiguous | -1.034 | Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | N |
V/Q | 0.6166 | likely_pathogenic | 0.6145 | pathogenic | -2.057 | Highly Destabilizing | 0.555 | D | 0.617 | neutral | None | None | None | None | N |
V/R | 0.573 | likely_pathogenic | 0.5652 | pathogenic | -1.124 | Destabilizing | 0.555 | D | 0.657 | neutral | None | None | None | None | N |
V/S | 0.2092 | likely_benign | 0.2032 | benign | -2.313 | Highly Destabilizing | 0.007 | N | 0.437 | neutral | None | None | None | None | N |
V/T | 0.1257 | likely_benign | 0.1236 | benign | -2.137 | Highly Destabilizing | 0.081 | N | 0.502 | neutral | None | None | None | None | N |
V/W | 0.8422 | likely_pathogenic | 0.8427 | pathogenic | -1.63 | Destabilizing | 0.935 | D | 0.604 | neutral | None | None | None | None | N |
V/Y | 0.6648 | likely_pathogenic | 0.6524 | pathogenic | -1.275 | Destabilizing | 0.555 | D | 0.642 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.