Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5611 | 17056;17057;17058 | chr2:178732138;178732137;178732136 | chr2:179596865;179596864;179596863 |
N2AB | 5294 | 16105;16106;16107 | chr2:178732138;178732137;178732136 | chr2:179596865;179596864;179596863 |
N2A | 4367 | 13324;13325;13326 | chr2:178732138;178732137;178732136 | chr2:179596865;179596864;179596863 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs775946529 | -0.264 | 1.0 | N | 0.871 | 0.438 | 0.644143578622 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
S/R | rs775946529 | -0.264 | 1.0 | N | 0.871 | 0.438 | 0.644143578622 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0923 | likely_benign | 0.1048 | benign | -0.8 | Destabilizing | 0.998 | D | 0.431 | neutral | None | None | None | None | N |
S/C | 0.1619 | likely_benign | 0.2235 | benign | -0.515 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.5371753 | None | None | N |
S/D | 0.5608 | ambiguous | 0.5652 | pathogenic | -0.064 | Destabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | N |
S/E | 0.6906 | likely_pathogenic | 0.7056 | pathogenic | -0.079 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
S/F | 0.3999 | ambiguous | 0.4737 | ambiguous | -1.056 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
S/G | 0.0874 | likely_benign | 0.1016 | benign | -1.024 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.489988878 | None | None | N |
S/H | 0.5897 | likely_pathogenic | 0.6304 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
S/I | 0.3294 | likely_benign | 0.3752 | ambiguous | -0.312 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.518564066 | None | None | N |
S/K | 0.8044 | likely_pathogenic | 0.8323 | pathogenic | -0.625 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
S/L | 0.1564 | likely_benign | 0.1849 | benign | -0.312 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
S/M | 0.2857 | likely_benign | 0.3301 | benign | 0.009 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
S/N | 0.2291 | likely_benign | 0.2287 | benign | -0.545 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.50290212 | None | None | N |
S/P | 0.7293 | likely_pathogenic | 0.8042 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/Q | 0.6803 | likely_pathogenic | 0.7099 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
S/R | 0.6755 | likely_pathogenic | 0.7245 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.519525118 | None | None | N |
S/T | 0.0918 | likely_benign | 0.0962 | benign | -0.625 | Destabilizing | 0.999 | D | 0.491 | neutral | N | 0.508529246 | None | None | N |
S/V | 0.3332 | likely_benign | 0.3885 | ambiguous | -0.443 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
S/W | 0.5852 | likely_pathogenic | 0.6632 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
S/Y | 0.3677 | ambiguous | 0.4146 | ambiguous | -0.74 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.