Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5630 | 17113;17114;17115 | chr2:178732081;178732080;178732079 | chr2:179596808;179596807;179596806 |
N2AB | 5313 | 16162;16163;16164 | chr2:178732081;178732080;178732079 | chr2:179596808;179596807;179596806 |
N2A | 4386 | 13381;13382;13383 | chr2:178732081;178732080;178732079 | chr2:179596808;179596807;179596806 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs2080640128 | None | None | N | 0.147 | 0.164 | 0.661077055835 | gnomAD-4.0.0 | 2.75152E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80748E-06 | 2.34439E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1378 | likely_benign | 0.1336 | benign | -1.113 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
I/C | 0.5218 | ambiguous | 0.5526 | ambiguous | -0.893 | Destabilizing | 0.356 | N | 0.531 | neutral | None | None | None | None | N |
I/D | 0.3954 | ambiguous | 0.4072 | ambiguous | 0.04 | Stabilizing | 0.136 | N | 0.602 | neutral | None | None | None | None | N |
I/E | 0.3227 | likely_benign | 0.3374 | benign | 0.014 | Stabilizing | 0.072 | N | 0.587 | neutral | None | None | None | None | N |
I/F | 0.1151 | likely_benign | 0.1185 | benign | -0.859 | Destabilizing | None | N | 0.153 | neutral | N | 0.428700238 | None | None | N |
I/G | 0.3959 | ambiguous | 0.3986 | ambiguous | -1.367 | Destabilizing | 0.016 | N | 0.47 | neutral | None | None | None | None | N |
I/H | 0.2966 | likely_benign | 0.3064 | benign | -0.628 | Destabilizing | 0.628 | D | 0.557 | neutral | None | None | None | None | N |
I/K | 0.1897 | likely_benign | 0.1988 | benign | -0.435 | Destabilizing | 0.072 | N | 0.563 | neutral | None | None | None | None | N |
I/L | 0.089 | likely_benign | 0.0926 | benign | -0.524 | Destabilizing | None | N | 0.077 | neutral | N | 0.404284583 | None | None | N |
I/M | 0.0725 | likely_benign | 0.0733 | benign | -0.503 | Destabilizing | 0.171 | N | 0.481 | neutral | N | 0.475819395 | None | None | N |
I/N | 0.1536 | likely_benign | 0.1594 | benign | -0.237 | Destabilizing | 0.106 | N | 0.632 | neutral | N | 0.40611138 | None | None | N |
I/P | 0.5652 | likely_pathogenic | 0.5716 | pathogenic | -0.687 | Destabilizing | 0.136 | N | 0.628 | neutral | None | None | None | None | N |
I/Q | 0.2501 | likely_benign | 0.2599 | benign | -0.416 | Destabilizing | 0.356 | N | 0.62 | neutral | None | None | None | None | N |
I/R | 0.1392 | likely_benign | 0.1433 | benign | None | Stabilizing | 0.136 | N | 0.635 | neutral | None | None | None | None | N |
I/S | 0.1449 | likely_benign | 0.1472 | benign | -0.934 | Destabilizing | 0.012 | N | 0.422 | neutral | N | 0.354719768 | None | None | N |
I/T | 0.083 | likely_benign | 0.0818 | benign | -0.841 | Destabilizing | None | N | 0.147 | neutral | N | 0.36968922 | None | None | N |
I/V | 0.0598 | likely_benign | 0.0607 | benign | -0.687 | Destabilizing | None | N | 0.078 | neutral | N | 0.411730631 | None | None | N |
I/W | 0.5745 | likely_pathogenic | 0.6044 | pathogenic | -0.846 | Destabilizing | 0.864 | D | 0.549 | neutral | None | None | None | None | N |
I/Y | 0.3342 | likely_benign | 0.3474 | ambiguous | -0.581 | Destabilizing | 0.038 | N | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.