Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5641 | 17146;17147;17148 | chr2:178731954;178731953;178731952 | chr2:179596681;179596680;179596679 |
N2AB | 5324 | 16195;16196;16197 | chr2:178731954;178731953;178731952 | chr2:179596681;179596680;179596679 |
N2A | 4397 | 13414;13415;13416 | chr2:178731954;178731953;178731952 | chr2:179596681;179596680;179596679 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.062 | N | 0.365 | 0.27 | 0.316198179892 | gnomAD-4.0.0 | 1.60697E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89712E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2142 | likely_benign | 0.218 | benign | -0.068 | Destabilizing | 0.035 | N | 0.381 | neutral | None | None | None | None | I |
K/C | 0.5929 | likely_pathogenic | 0.6369 | pathogenic | -0.31 | Destabilizing | 0.824 | D | 0.417 | neutral | None | None | None | None | I |
K/D | 0.3729 | ambiguous | 0.3868 | ambiguous | 0.199 | Stabilizing | 0.081 | N | 0.374 | neutral | None | None | None | None | I |
K/E | 0.0957 | likely_benign | 0.0998 | benign | 0.242 | Stabilizing | 0.062 | N | 0.409 | neutral | N | 0.508411816 | None | None | I |
K/F | 0.7297 | likely_pathogenic | 0.7626 | pathogenic | -0.093 | Destabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | I |
K/G | 0.2831 | likely_benign | 0.3052 | benign | -0.321 | Destabilizing | 0.081 | N | 0.427 | neutral | None | None | None | None | I |
K/H | 0.2485 | likely_benign | 0.2636 | benign | -0.521 | Destabilizing | 0.824 | D | 0.35 | neutral | None | None | None | None | I |
K/I | 0.339 | likely_benign | 0.3771 | ambiguous | 0.533 | Stabilizing | 0.235 | N | 0.415 | neutral | None | None | None | None | I |
K/L | 0.3158 | likely_benign | 0.3469 | ambiguous | 0.533 | Stabilizing | 0.081 | N | 0.429 | neutral | None | None | None | None | I |
K/M | 0.2033 | likely_benign | 0.2235 | benign | 0.22 | Stabilizing | 0.484 | N | 0.347 | neutral | N | 0.487822831 | None | None | I |
K/N | 0.2547 | likely_benign | 0.2622 | benign | 0.102 | Stabilizing | 0.062 | N | 0.348 | neutral | N | 0.484669279 | None | None | I |
K/P | 0.8256 | likely_pathogenic | 0.8485 | pathogenic | 0.363 | Stabilizing | 0.38 | N | 0.366 | neutral | None | None | None | None | I |
K/Q | 0.0982 | likely_benign | 0.0991 | benign | -0.016 | Destabilizing | 0.004 | N | 0.233 | neutral | N | 0.501944416 | None | None | I |
K/R | 0.0739 | likely_benign | 0.0757 | benign | -0.084 | Destabilizing | 0.001 | N | 0.228 | neutral | N | 0.463524888 | None | None | I |
K/S | 0.2416 | likely_benign | 0.2386 | benign | -0.452 | Destabilizing | 0.001 | N | 0.211 | neutral | None | None | None | None | I |
K/T | 0.1178 | likely_benign | 0.1212 | benign | -0.237 | Destabilizing | 0.062 | N | 0.365 | neutral | N | 0.515529789 | None | None | I |
K/V | 0.2562 | likely_benign | 0.2845 | benign | 0.363 | Stabilizing | 0.005 | N | 0.265 | neutral | None | None | None | None | I |
K/W | 0.6623 | likely_pathogenic | 0.7117 | pathogenic | -0.07 | Destabilizing | 0.935 | D | 0.488 | neutral | None | None | None | None | I |
K/Y | 0.5493 | ambiguous | 0.5986 | pathogenic | 0.264 | Stabilizing | 0.555 | D | 0.406 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.