Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5648 | 17167;17168;17169 | chr2:178731933;178731932;178731931 | chr2:179596660;179596659;179596658 |
N2AB | 5331 | 16216;16217;16218 | chr2:178731933;178731932;178731931 | chr2:179596660;179596659;179596658 |
N2A | 4404 | 13435;13436;13437 | chr2:178731933;178731932;178731931 | chr2:179596660;179596659;179596658 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.37 | N | 0.335 | 0.26 | 0.417208245017 | gnomAD-4.0.0 | 6.85476E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16206E-05 | 0 |
V/L | rs1451261949 | 0.338 | 0.9 | N | 0.483 | 0.355 | 0.478755181577 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.66E-05 | 0 | 0 |
V/L | rs1451261949 | 0.338 | 0.9 | N | 0.483 | 0.355 | 0.478755181577 | gnomAD-4.0.0 | 6.85476E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87406E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2784 | likely_benign | 0.2838 | benign | -1.515 | Destabilizing | 0.948 | D | 0.482 | neutral | N | 0.505241012 | None | None | N |
V/C | 0.8696 | likely_pathogenic | 0.8661 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
V/D | 0.8252 | likely_pathogenic | 0.835 | pathogenic | -1.797 | Destabilizing | 0.997 | D | 0.671 | neutral | D | 0.529180492 | None | None | N |
V/E | 0.7426 | likely_pathogenic | 0.7531 | pathogenic | -1.546 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
V/F | 0.394 | ambiguous | 0.4401 | ambiguous | -0.761 | Destabilizing | 0.997 | D | 0.603 | neutral | N | 0.507682422 | None | None | N |
V/G | 0.3285 | likely_benign | 0.3205 | benign | -2.074 | Highly Destabilizing | 0.121 | N | 0.467 | neutral | N | 0.512748561 | None | None | N |
V/H | 0.9111 | likely_pathogenic | 0.9216 | pathogenic | -1.951 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
V/I | 0.1061 | likely_benign | 0.1193 | benign | 0.047 | Stabilizing | 0.37 | N | 0.335 | neutral | N | 0.494448015 | None | None | N |
V/K | 0.8239 | likely_pathogenic | 0.8282 | pathogenic | -0.984 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
V/L | 0.4568 | ambiguous | 0.5121 | ambiguous | 0.047 | Stabilizing | 0.9 | D | 0.483 | neutral | N | 0.491651627 | None | None | N |
V/M | 0.2875 | likely_benign | 0.3284 | benign | -0.061 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
V/N | 0.6612 | likely_pathogenic | 0.6701 | pathogenic | -1.349 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
V/P | 0.9284 | likely_pathogenic | 0.9368 | pathogenic | -0.446 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
V/Q | 0.7768 | likely_pathogenic | 0.7848 | pathogenic | -1.098 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
V/R | 0.7959 | likely_pathogenic | 0.7982 | pathogenic | -1.103 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
V/S | 0.4539 | ambiguous | 0.4573 | ambiguous | -1.984 | Destabilizing | 0.995 | D | 0.623 | neutral | None | None | None | None | N |
V/T | 0.2918 | likely_benign | 0.3032 | benign | -1.579 | Destabilizing | 0.992 | D | 0.575 | neutral | None | None | None | None | N |
V/W | 0.9661 | likely_pathogenic | 0.9695 | pathogenic | -1.306 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
V/Y | 0.8354 | likely_pathogenic | 0.8436 | pathogenic | -0.828 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.