Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5658 | 17197;17198;17199 | chr2:178731903;178731902;178731901 | chr2:179596630;179596629;179596628 |
N2AB | 5341 | 16246;16247;16248 | chr2:178731903;178731902;178731901 | chr2:179596630;179596629;179596628 |
N2A | 4414 | 13465;13466;13467 | chr2:178731903;178731902;178731901 | chr2:179596630;179596629;179596628 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.425 | N | 0.587 | 0.131 | 0.146414634003 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
A/V | None | None | 0.023 | N | 0.384 | 0.213 | 0.211220785272 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4864 | ambiguous | 0.4309 | ambiguous | -0.413 | Destabilizing | 0.003 | N | 0.291 | neutral | None | None | None | None | N |
A/D | 0.9406 | likely_pathogenic | 0.9482 | pathogenic | -1.747 | Destabilizing | 0.784 | D | 0.787 | deleterious | N | 0.500770115 | None | None | N |
A/E | 0.9257 | likely_pathogenic | 0.9365 | pathogenic | -1.499 | Destabilizing | 0.828 | D | 0.768 | deleterious | None | None | None | None | N |
A/F | 0.8417 | likely_pathogenic | 0.862 | pathogenic | -0.26 | Destabilizing | 0.944 | D | 0.819 | deleterious | None | None | None | None | N |
A/G | 0.1415 | likely_benign | 0.1487 | benign | -1.056 | Destabilizing | 0.001 | N | 0.293 | neutral | N | 0.390159627 | None | None | N |
A/H | 0.9664 | likely_pathogenic | 0.9689 | pathogenic | -1.742 | Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
A/I | 0.5945 | likely_pathogenic | 0.6598 | pathogenic | 0.91 | Stabilizing | 0.543 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/K | 0.9806 | likely_pathogenic | 0.9837 | pathogenic | -0.541 | Destabilizing | 0.828 | D | 0.751 | deleterious | None | None | None | None | N |
A/L | 0.4876 | ambiguous | 0.5174 | ambiguous | 0.91 | Stabilizing | 0.329 | N | 0.685 | prob.neutral | None | None | None | None | N |
A/M | 0.57 | likely_pathogenic | 0.6137 | pathogenic | 0.588 | Stabilizing | 0.944 | D | 0.781 | deleterious | None | None | None | None | N |
A/N | 0.8832 | likely_pathogenic | 0.8933 | pathogenic | -0.952 | Destabilizing | 0.893 | D | 0.791 | deleterious | None | None | None | None | N |
A/P | 0.9358 | likely_pathogenic | 0.9503 | pathogenic | 0.476 | Stabilizing | 0.975 | D | 0.773 | deleterious | N | 0.500770115 | None | None | N |
A/Q | 0.9298 | likely_pathogenic | 0.935 | pathogenic | -0.638 | Destabilizing | 0.981 | D | 0.787 | deleterious | None | None | None | None | N |
A/R | 0.961 | likely_pathogenic | 0.9662 | pathogenic | -0.935 | Destabilizing | 0.944 | D | 0.786 | deleterious | None | None | None | None | N |
A/S | 0.1974 | likely_benign | 0.1988 | benign | -1.355 | Destabilizing | 0.425 | N | 0.587 | neutral | N | 0.470793924 | None | None | N |
A/T | 0.1862 | likely_benign | 0.1956 | benign | -0.959 | Destabilizing | 0.642 | D | 0.605 | neutral | N | 0.481664279 | None | None | N |
A/V | 0.2592 | likely_benign | 0.2937 | benign | 0.476 | Stabilizing | 0.023 | N | 0.384 | neutral | N | 0.424133341 | None | None | N |
A/W | 0.9766 | likely_pathogenic | 0.9803 | pathogenic | -1.158 | Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | N |
A/Y | 0.9328 | likely_pathogenic | 0.9403 | pathogenic | -0.452 | Destabilizing | 0.981 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.