Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5664 | 17215;17216;17217 | chr2:178731885;178731884;178731883 | chr2:179596612;179596611;179596610 |
N2AB | 5347 | 16264;16265;16266 | chr2:178731885;178731884;178731883 | chr2:179596612;179596611;179596610 |
N2A | 4420 | 13483;13484;13485 | chr2:178731885;178731884;178731883 | chr2:179596612;179596611;179596610 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.379 | D | 0.431 | 0.504 | 0.73019596334 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85856E-06 | 0 | 0 |
P/S | None | None | 0.045 | N | 0.213 | 0.327 | 0.252681307341 | gnomAD-4.0.0 | 6.84239E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99504E-07 | 0 | 0 |
P/T | None | None | 0.004 | D | 0.215 | 0.397 | 0.393316636838 | gnomAD-4.0.0 | 2.05272E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69851E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0752 | likely_benign | 0.0862 | benign | -0.543 | Destabilizing | 0.002 | N | 0.171 | neutral | N | 0.497648609 | None | None | I |
P/C | 0.5392 | ambiguous | 0.6921 | pathogenic | -0.506 | Destabilizing | 0.992 | D | 0.53 | neutral | None | None | None | None | I |
P/D | 0.5735 | likely_pathogenic | 0.692 | pathogenic | -0.616 | Destabilizing | 0.617 | D | 0.502 | neutral | None | None | None | None | I |
P/E | 0.2958 | likely_benign | 0.3863 | ambiguous | -0.701 | Destabilizing | 0.617 | D | 0.519 | neutral | None | None | None | None | I |
P/F | 0.4675 | ambiguous | 0.6298 | pathogenic | -0.72 | Destabilizing | 0.92 | D | 0.548 | neutral | None | None | None | None | I |
P/G | 0.3975 | ambiguous | 0.4352 | ambiguous | -0.692 | Destabilizing | 0.447 | N | 0.429 | neutral | None | None | None | None | I |
P/H | 0.2141 | likely_benign | 0.314 | benign | -0.246 | Destabilizing | 0.99 | D | 0.49 | neutral | D | 0.561863031 | None | None | I |
P/I | 0.2891 | likely_benign | 0.46 | ambiguous | -0.279 | Destabilizing | 0.739 | D | 0.583 | neutral | None | None | None | None | I |
P/K | 0.3074 | likely_benign | 0.4231 | ambiguous | -0.516 | Destabilizing | 0.617 | D | 0.519 | neutral | None | None | None | None | I |
P/L | 0.1139 | likely_benign | 0.1825 | benign | -0.279 | Destabilizing | 0.379 | N | 0.431 | neutral | D | 0.561863031 | None | None | I |
P/M | 0.2784 | likely_benign | 0.4102 | ambiguous | -0.453 | Destabilizing | 0.25 | N | 0.335 | neutral | None | None | None | None | I |
P/N | 0.4149 | ambiguous | 0.5596 | ambiguous | -0.222 | Destabilizing | 0.85 | D | 0.53 | neutral | None | None | None | None | I |
P/Q | 0.154 | likely_benign | 0.2214 | benign | -0.443 | Destabilizing | 0.92 | D | 0.496 | neutral | None | None | None | None | I |
P/R | 0.193 | likely_benign | 0.2777 | benign | -0.021 | Destabilizing | 0.81 | D | 0.531 | neutral | D | 0.561459423 | None | None | I |
P/S | 0.1152 | likely_benign | 0.1511 | benign | -0.519 | Destabilizing | 0.045 | N | 0.213 | neutral | N | 0.507623651 | None | None | I |
P/T | 0.117 | likely_benign | 0.1722 | benign | -0.508 | Destabilizing | 0.004 | N | 0.215 | neutral | D | 0.561459423 | None | None | I |
P/V | 0.1978 | likely_benign | 0.305 | benign | -0.334 | Destabilizing | 0.447 | N | 0.471 | neutral | None | None | None | None | I |
P/W | 0.709 | likely_pathogenic | 0.8248 | pathogenic | -0.829 | Destabilizing | 0.992 | D | 0.582 | neutral | None | None | None | None | I |
P/Y | 0.4451 | ambiguous | 0.6 | pathogenic | -0.528 | Destabilizing | 0.972 | D | 0.551 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.