Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5666 | 17221;17222;17223 | chr2:178731879;178731878;178731877 | chr2:179596606;179596605;179596604 |
N2AB | 5349 | 16270;16271;16272 | chr2:178731879;178731878;178731877 | chr2:179596606;179596605;179596604 |
N2A | 4422 | 13489;13490;13491 | chr2:178731879;178731878;178731877 | chr2:179596606;179596605;179596604 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.008 | N | 0.21 | 0.339 | 0.190952846119 | gnomAD-4.0.0 | 3.18275E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85851E-06 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8327 | likely_pathogenic | 0.9104 | pathogenic | -2.955 | Highly Destabilizing | 0.775 | D | 0.563 | neutral | None | None | None | None | I |
F/C | 0.6271 | likely_pathogenic | 0.7973 | pathogenic | -1.78 | Destabilizing | 0.995 | D | 0.64 | neutral | N | 0.504392923 | None | None | I |
F/D | 0.9772 | likely_pathogenic | 0.9894 | pathogenic | -2.383 | Highly Destabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | I |
F/E | 0.9762 | likely_pathogenic | 0.9885 | pathogenic | -2.244 | Highly Destabilizing | 0.961 | D | 0.701 | prob.neutral | None | None | None | None | I |
F/G | 0.9493 | likely_pathogenic | 0.9751 | pathogenic | -3.356 | Highly Destabilizing | 0.961 | D | 0.665 | neutral | None | None | None | None | I |
F/H | 0.8755 | likely_pathogenic | 0.9261 | pathogenic | -1.603 | Destabilizing | 0.923 | D | 0.574 | neutral | None | None | None | None | I |
F/I | 0.5046 | ambiguous | 0.6623 | pathogenic | -1.681 | Destabilizing | 0.565 | D | 0.499 | neutral | N | 0.499925618 | None | None | I |
F/K | 0.9756 | likely_pathogenic | 0.9887 | pathogenic | -2.072 | Highly Destabilizing | 0.961 | D | 0.698 | prob.neutral | None | None | None | None | I |
F/L | 0.8893 | likely_pathogenic | 0.9389 | pathogenic | -1.681 | Destabilizing | 0.008 | N | 0.21 | neutral | N | 0.482222505 | None | None | I |
F/M | 0.691 | likely_pathogenic | 0.8071 | pathogenic | -1.258 | Destabilizing | 0.923 | D | 0.477 | neutral | None | None | None | None | I |
F/N | 0.928 | likely_pathogenic | 0.9627 | pathogenic | -2.233 | Highly Destabilizing | 0.961 | D | 0.708 | prob.delet. | None | None | None | None | I |
F/P | 0.9769 | likely_pathogenic | 0.9883 | pathogenic | -2.11 | Highly Destabilizing | 0.987 | D | 0.706 | prob.neutral | None | None | None | None | I |
F/Q | 0.9519 | likely_pathogenic | 0.9748 | pathogenic | -2.298 | Highly Destabilizing | 0.961 | D | 0.707 | prob.neutral | None | None | None | None | I |
F/R | 0.9428 | likely_pathogenic | 0.9705 | pathogenic | -1.343 | Destabilizing | 0.961 | D | 0.707 | prob.neutral | None | None | None | None | I |
F/S | 0.7857 | likely_pathogenic | 0.8938 | pathogenic | -3.008 | Highly Destabilizing | 0.901 | D | 0.602 | neutral | N | 0.512470841 | None | None | I |
F/T | 0.8556 | likely_pathogenic | 0.93 | pathogenic | -2.767 | Highly Destabilizing | 0.961 | D | 0.601 | neutral | None | None | None | None | I |
F/V | 0.463 | ambiguous | 0.625 | pathogenic | -2.11 | Highly Destabilizing | 0.565 | D | 0.494 | neutral | N | 0.482147934 | None | None | I |
F/W | 0.6634 | likely_pathogenic | 0.7407 | pathogenic | -0.694 | Destabilizing | 0.989 | D | 0.477 | neutral | None | None | None | None | I |
F/Y | 0.3056 | likely_benign | 0.3573 | ambiguous | -1.05 | Destabilizing | 0.008 | N | 0.279 | neutral | N | 0.492783128 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.