Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5668 | 17227;17228;17229 | chr2:178731873;178731872;178731871 | chr2:179596600;179596599;179596598 |
N2AB | 5351 | 16276;16277;16278 | chr2:178731873;178731872;178731871 | chr2:179596600;179596599;179596598 |
N2A | 4424 | 13495;13496;13497 | chr2:178731873;178731872;178731871 | chr2:179596600;179596599;179596598 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.989 | D | 0.84 | 0.702 | 0.909692242837 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5234 | ambiguous | 0.5433 | ambiguous | -1.953 | Destabilizing | 0.525 | D | 0.651 | neutral | None | None | None | None | I |
I/C | 0.7378 | likely_pathogenic | 0.7413 | pathogenic | -1.093 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | I |
I/D | 0.8897 | likely_pathogenic | 0.9201 | pathogenic | -1.515 | Destabilizing | 0.991 | D | 0.846 | deleterious | None | None | None | None | I |
I/E | 0.8102 | likely_pathogenic | 0.8504 | pathogenic | -1.444 | Destabilizing | 0.974 | D | 0.825 | deleterious | None | None | None | None | I |
I/F | 0.2131 | likely_benign | 0.2501 | benign | -1.267 | Destabilizing | 0.934 | D | 0.684 | prob.neutral | D | 0.539799089 | None | None | I |
I/G | 0.8155 | likely_pathogenic | 0.8343 | pathogenic | -2.354 | Highly Destabilizing | 0.974 | D | 0.823 | deleterious | None | None | None | None | I |
I/H | 0.7794 | likely_pathogenic | 0.8205 | pathogenic | -1.595 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | I |
I/K | 0.6513 | likely_pathogenic | 0.7104 | pathogenic | -1.377 | Destabilizing | 0.974 | D | 0.827 | deleterious | None | None | None | None | I |
I/L | 0.1709 | likely_benign | 0.179 | benign | -0.881 | Destabilizing | 0.005 | N | 0.29 | neutral | D | 0.538758939 | None | None | I |
I/M | 0.106 | likely_benign | 0.1146 | benign | -0.654 | Destabilizing | 0.934 | D | 0.637 | neutral | D | 0.526204751 | None | None | I |
I/N | 0.4966 | ambiguous | 0.5568 | ambiguous | -1.257 | Destabilizing | 0.989 | D | 0.84 | deleterious | D | 0.5446514 | None | None | I |
I/P | 0.8475 | likely_pathogenic | 0.8461 | pathogenic | -1.21 | Destabilizing | 0.991 | D | 0.845 | deleterious | None | None | None | None | I |
I/Q | 0.7266 | likely_pathogenic | 0.7772 | pathogenic | -1.346 | Destabilizing | 0.991 | D | 0.841 | deleterious | None | None | None | None | I |
I/R | 0.6193 | likely_pathogenic | 0.6931 | pathogenic | -0.856 | Destabilizing | 0.974 | D | 0.84 | deleterious | None | None | None | None | I |
I/S | 0.5527 | ambiguous | 0.5976 | pathogenic | -1.906 | Destabilizing | 0.966 | D | 0.81 | deleterious | N | 0.510164411 | None | None | I |
I/T | 0.4087 | ambiguous | 0.4623 | ambiguous | -1.706 | Destabilizing | 0.801 | D | 0.713 | prob.delet. | N | 0.514683861 | None | None | I |
I/V | 0.0759 | likely_benign | 0.0787 | benign | -1.21 | Destabilizing | 0.002 | N | 0.229 | neutral | N | 0.43963959 | None | None | I |
I/W | 0.8578 | likely_pathogenic | 0.8838 | pathogenic | -1.424 | Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | I |
I/Y | 0.5967 | likely_pathogenic | 0.6331 | pathogenic | -1.191 | Destabilizing | 0.974 | D | 0.747 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.