Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5691 | 17296;17297;17298 | chr2:178731804;178731803;178731802 | chr2:179596531;179596530;179596529 |
N2AB | 5374 | 16345;16346;16347 | chr2:178731804;178731803;178731802 | chr2:179596531;179596530;179596529 |
N2A | 4447 | 13564;13565;13566 | chr2:178731804;178731803;178731802 | chr2:179596531;179596530;179596529 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.896 | N | 0.653 | 0.374 | 0.797747263677 | gnomAD-4.0.0 | 1.59122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8583E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.114 | likely_benign | 0.1321 | benign | -1.686 | Destabilizing | 0.25 | N | 0.491 | neutral | None | None | None | None | N |
L/C | 0.2997 | likely_benign | 0.3591 | ambiguous | -0.919 | Destabilizing | 0.992 | D | 0.558 | neutral | None | None | None | None | N |
L/D | 0.3474 | ambiguous | 0.4406 | ambiguous | -1.274 | Destabilizing | 0.85 | D | 0.649 | neutral | None | None | None | None | N |
L/E | 0.1578 | likely_benign | 0.1809 | benign | -1.28 | Destabilizing | 0.447 | N | 0.609 | neutral | None | None | None | None | N |
L/F | 0.0879 | likely_benign | 0.1086 | benign | -1.211 | Destabilizing | 0.85 | D | 0.51 | neutral | None | None | None | None | N |
L/G | 0.3018 | likely_benign | 0.3828 | ambiguous | -2.005 | Highly Destabilizing | 0.617 | D | 0.61 | neutral | None | None | None | None | N |
L/H | 0.0966 | likely_benign | 0.119 | benign | -1.286 | Destabilizing | 0.977 | D | 0.633 | neutral | None | None | None | None | N |
L/I | 0.0674 | likely_benign | 0.0727 | benign | -0.884 | Destabilizing | 0.25 | N | 0.437 | neutral | None | None | None | None | N |
L/K | 0.135 | likely_benign | 0.1464 | benign | -1.215 | Destabilizing | 0.447 | N | 0.581 | neutral | None | None | None | None | N |
L/M | 0.0802 | likely_benign | 0.0861 | benign | -0.608 | Destabilizing | 0.036 | N | 0.253 | neutral | N | 0.496733385 | None | None | N |
L/N | 0.1846 | likely_benign | 0.2227 | benign | -0.975 | Destabilizing | 0.85 | D | 0.644 | neutral | None | None | None | None | N |
L/P | 0.5861 | likely_pathogenic | 0.7962 | pathogenic | -1.121 | Destabilizing | 0.896 | D | 0.653 | neutral | N | 0.49080749 | None | None | N |
L/Q | 0.0754 | likely_benign | 0.0815 | benign | -1.175 | Destabilizing | 0.036 | N | 0.437 | neutral | N | 0.45232646 | None | None | N |
L/R | 0.0951 | likely_benign | 0.1043 | benign | -0.593 | Destabilizing | 0.681 | D | 0.625 | neutral | N | 0.457558921 | None | None | N |
L/S | 0.1149 | likely_benign | 0.1436 | benign | -1.545 | Destabilizing | 0.059 | N | 0.451 | neutral | None | None | None | None | N |
L/T | 0.0955 | likely_benign | 0.1058 | benign | -1.443 | Destabilizing | 0.021 | N | 0.367 | neutral | None | None | None | None | N |
L/V | 0.065 | likely_benign | 0.0693 | benign | -1.121 | Destabilizing | 0.016 | N | 0.175 | neutral | N | 0.428161521 | None | None | N |
L/W | 0.1601 | likely_benign | 0.2118 | benign | -1.301 | Destabilizing | 0.992 | D | 0.635 | neutral | None | None | None | None | N |
L/Y | 0.1906 | likely_benign | 0.2388 | benign | -1.093 | Destabilizing | 0.92 | D | 0.58 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.