Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5696 | 17311;17312;17313 | chr2:178731789;178731788;178731787 | chr2:179596516;179596515;179596514 |
N2AB | 5379 | 16360;16361;16362 | chr2:178731789;178731788;178731787 | chr2:179596516;179596515;179596514 |
N2A | 4452 | 13579;13580;13581 | chr2:178731789;178731788;178731787 | chr2:179596516;179596515;179596514 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.497 | D | 0.689 | 0.526 | 0.433047596574 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8066 | likely_pathogenic | 0.8724 | pathogenic | -2.961 | Highly Destabilizing | 0.157 | N | 0.687 | prob.neutral | None | None | None | None | N |
I/C | 0.8523 | likely_pathogenic | 0.8817 | pathogenic | -1.93 | Destabilizing | 0.909 | D | 0.759 | deleterious | None | None | None | None | N |
I/D | 0.9818 | likely_pathogenic | 0.9905 | pathogenic | -3.387 | Highly Destabilizing | 0.726 | D | 0.863 | deleterious | None | None | None | None | N |
I/E | 0.9707 | likely_pathogenic | 0.9832 | pathogenic | -3.071 | Highly Destabilizing | 0.726 | D | 0.856 | deleterious | None | None | None | None | N |
I/F | 0.3326 | likely_benign | 0.3763 | ambiguous | -1.643 | Destabilizing | 0.497 | N | 0.689 | prob.neutral | D | 0.559023464 | None | None | N |
I/G | 0.9309 | likely_pathogenic | 0.9644 | pathogenic | -3.529 | Highly Destabilizing | 0.726 | D | 0.847 | deleterious | None | None | None | None | N |
I/H | 0.9353 | likely_pathogenic | 0.9553 | pathogenic | -3.115 | Highly Destabilizing | 0.968 | D | 0.855 | deleterious | None | None | None | None | N |
I/K | 0.9525 | likely_pathogenic | 0.9689 | pathogenic | -2.113 | Highly Destabilizing | 0.726 | D | 0.857 | deleterious | None | None | None | None | N |
I/L | 0.1902 | likely_benign | 0.2128 | benign | -1.22 | Destabilizing | 0.025 | N | 0.399 | neutral | D | 0.534869416 | None | None | N |
I/M | 0.2129 | likely_benign | 0.2222 | benign | -1.493 | Destabilizing | 0.497 | N | 0.665 | neutral | D | 0.605981444 | None | None | N |
I/N | 0.8271 | likely_pathogenic | 0.8692 | pathogenic | -2.834 | Highly Destabilizing | 0.859 | D | 0.868 | deleterious | D | 0.61668066 | None | None | N |
I/P | 0.973 | likely_pathogenic | 0.9866 | pathogenic | -1.797 | Destabilizing | 0.89 | D | 0.863 | deleterious | None | None | None | None | N |
I/Q | 0.9428 | likely_pathogenic | 0.9627 | pathogenic | -2.457 | Highly Destabilizing | 0.89 | D | 0.878 | deleterious | None | None | None | None | N |
I/R | 0.9346 | likely_pathogenic | 0.9593 | pathogenic | -2.227 | Highly Destabilizing | 0.726 | D | 0.867 | deleterious | None | None | None | None | N |
I/S | 0.8421 | likely_pathogenic | 0.8889 | pathogenic | -3.293 | Highly Destabilizing | 0.497 | N | 0.805 | deleterious | D | 0.61668066 | None | None | N |
I/T | 0.8575 | likely_pathogenic | 0.9037 | pathogenic | -2.825 | Highly Destabilizing | 0.124 | N | 0.743 | deleterious | D | 0.606990465 | None | None | N |
I/V | 0.0809 | likely_benign | 0.1051 | benign | -1.797 | Destabilizing | None | N | 0.275 | neutral | D | 0.535737354 | None | None | N |
I/W | 0.9581 | likely_pathogenic | 0.972 | pathogenic | -1.901 | Destabilizing | 0.968 | D | 0.854 | deleterious | None | None | None | None | N |
I/Y | 0.8023 | likely_pathogenic | 0.8256 | pathogenic | -1.869 | Destabilizing | 0.726 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.