Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5699 | 17320;17321;17322 | chr2:178731780;178731779;178731778 | chr2:179596507;179596506;179596505 |
N2AB | 5382 | 16369;16370;16371 | chr2:178731780;178731779;178731778 | chr2:179596507;179596506;179596505 |
N2A | 4455 | 13588;13589;13590 | chr2:178731780;178731779;178731778 | chr2:179596507;179596506;179596505 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs929174376 | None | 0.997 | N | 0.646 | 0.545 | 0.883764784581 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/S | rs929174376 | None | 0.997 | N | 0.646 | 0.545 | 0.883764784581 | gnomAD-4.0.0 | 6.57419E-06 | None | None | None | None | N | None | 0 | 6.55222E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6235 | likely_pathogenic | 0.6194 | pathogenic | -3.554 | Highly Destabilizing | 0.985 | D | 0.547 | neutral | None | None | None | None | N |
F/C | 0.3269 | likely_benign | 0.3226 | benign | -2.466 | Highly Destabilizing | 1.0 | D | 0.631 | neutral | N | 0.483014726 | None | None | N |
F/D | 0.9819 | likely_pathogenic | 0.9752 | pathogenic | -3.811 | Highly Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/E | 0.9817 | likely_pathogenic | 0.9769 | pathogenic | -3.632 | Highly Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
F/G | 0.8798 | likely_pathogenic | 0.8686 | pathogenic | -3.943 | Highly Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/H | 0.9301 | likely_pathogenic | 0.9214 | pathogenic | -2.296 | Highly Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
F/I | 0.3448 | ambiguous | 0.3255 | benign | -2.262 | Highly Destabilizing | 0.961 | D | 0.536 | neutral | N | 0.449051294 | None | None | N |
F/K | 0.9905 | likely_pathogenic | 0.987 | pathogenic | -2.396 | Highly Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/L | 0.9005 | likely_pathogenic | 0.9038 | pathogenic | -2.262 | Highly Destabilizing | 0.135 | N | 0.308 | neutral | N | 0.404879229 | None | None | N |
F/M | 0.6023 | likely_pathogenic | 0.6189 | pathogenic | -2.121 | Highly Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | N |
F/N | 0.8935 | likely_pathogenic | 0.884 | pathogenic | -2.778 | Highly Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/P | 0.9827 | likely_pathogenic | 0.9716 | pathogenic | -2.707 | Highly Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
F/Q | 0.9754 | likely_pathogenic | 0.9706 | pathogenic | -2.836 | Highly Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/R | 0.9767 | likely_pathogenic | 0.9708 | pathogenic | -1.718 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/S | 0.6895 | likely_pathogenic | 0.6837 | pathogenic | -3.408 | Highly Destabilizing | 0.997 | D | 0.646 | neutral | N | 0.499637617 | None | None | N |
F/T | 0.6346 | likely_pathogenic | 0.6325 | pathogenic | -3.128 | Highly Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | N |
F/V | 0.2657 | likely_benign | 0.2635 | benign | -2.707 | Highly Destabilizing | 0.4 | N | 0.453 | neutral | N | 0.389538844 | None | None | N |
F/W | 0.8063 | likely_pathogenic | 0.7788 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
F/Y | 0.2935 | likely_benign | 0.2799 | benign | -1.342 | Destabilizing | 0.997 | D | 0.567 | neutral | N | 0.494175479 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.