Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5708 | 17347;17348;17349 | chr2:178731753;178731752;178731751 | chr2:179596480;179596479;179596478 |
N2AB | 5391 | 16396;16397;16398 | chr2:178731753;178731752;178731751 | chr2:179596480;179596479;179596478 |
N2A | 4464 | 13615;13616;13617 | chr2:178731753;178731752;178731751 | chr2:179596480;179596479;179596478 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs373282814 | -1.067 | 0.998 | N | 0.487 | 0.216 | 0.261217442401 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 1.24018E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/H | rs373282814 | -1.067 | 0.998 | N | 0.487 | 0.216 | 0.261217442401 | gnomAD-3.1.2 | 5.91E-05 | None | None | None | None | I | None | 2.17171E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/H | rs373282814 | -1.067 | 0.998 | N | 0.487 | 0.216 | 0.261217442401 | gnomAD-4.0.0 | 6.84231E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2782 | likely_benign | 0.2696 | benign | -1.173 | Destabilizing | 0.864 | D | 0.482 | neutral | None | None | None | None | I |
Q/C | 0.4778 | ambiguous | 0.4704 | ambiguous | -0.762 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
Q/D | 0.4939 | ambiguous | 0.501 | ambiguous | -1.989 | Destabilizing | 0.939 | D | 0.519 | neutral | None | None | None | None | I |
Q/E | 0.0962 | likely_benign | 0.0979 | benign | -1.713 | Destabilizing | 0.238 | N | 0.28 | neutral | N | 0.433696974 | None | None | I |
Q/F | 0.5497 | ambiguous | 0.5285 | ambiguous | -0.662 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
Q/G | 0.3548 | ambiguous | 0.3428 | ambiguous | -1.609 | Destabilizing | 0.969 | D | 0.529 | neutral | None | None | None | None | I |
Q/H | 0.147 | likely_benign | 0.1526 | benign | -1.205 | Destabilizing | 0.998 | D | 0.487 | neutral | N | 0.454033046 | None | None | I |
Q/I | 0.2947 | likely_benign | 0.2861 | benign | 0.016 | Stabilizing | 0.995 | D | 0.609 | neutral | None | None | None | None | I |
Q/K | 0.1082 | likely_benign | 0.1094 | benign | -0.504 | Destabilizing | 0.828 | D | 0.538 | neutral | N | 0.474562161 | None | None | I |
Q/L | 0.146 | likely_benign | 0.136 | benign | 0.016 | Stabilizing | 0.979 | D | 0.497 | neutral | N | 0.506519864 | None | None | I |
Q/M | 0.3572 | ambiguous | 0.3427 | ambiguous | 0.208 | Stabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | I |
Q/N | 0.297 | likely_benign | 0.2995 | benign | -1.385 | Destabilizing | 0.969 | D | 0.463 | neutral | None | None | None | None | I |
Q/P | 0.8637 | likely_pathogenic | 0.8497 | pathogenic | -0.355 | Destabilizing | 0.994 | D | 0.513 | neutral | N | 0.486380442 | None | None | I |
Q/R | 0.0999 | likely_benign | 0.0986 | benign | -0.657 | Destabilizing | 0.068 | N | 0.461 | neutral | N | 0.472425933 | None | None | I |
Q/S | 0.2546 | likely_benign | 0.2374 | benign | -1.635 | Destabilizing | 0.546 | D | 0.341 | neutral | None | None | None | None | I |
Q/T | 0.1817 | likely_benign | 0.1753 | benign | -1.167 | Destabilizing | 0.939 | D | 0.475 | neutral | None | None | None | None | I |
Q/V | 0.2204 | likely_benign | 0.2099 | benign | -0.355 | Destabilizing | 0.984 | D | 0.55 | neutral | None | None | None | None | I |
Q/W | 0.4896 | ambiguous | 0.475 | ambiguous | -0.682 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
Q/Y | 0.3414 | ambiguous | 0.3333 | benign | -0.31 | Destabilizing | 0.999 | D | 0.522 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.