Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5723 | 17392;17393;17394 | chr2:178731708;178731707;178731706 | chr2:179596435;179596434;179596433 |
N2AB | 5406 | 16441;16442;16443 | chr2:178731708;178731707;178731706 | chr2:179596435;179596434;179596433 |
N2A | 4479 | 13660;13661;13662 | chr2:178731708;178731707;178731706 | chr2:179596435;179596434;179596433 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs2080550527 | None | 0.081 | N | 0.348 | 0.211 | 0.296329037015 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/T | rs2080550527 | None | 0.081 | N | 0.348 | 0.211 | 0.296329037015 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47007E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1149 | likely_benign | 0.1095 | benign | -0.295 | Destabilizing | 0.025 | N | 0.216 | neutral | None | None | None | None | I |
R/C | 0.1556 | likely_benign | 0.1572 | benign | -0.269 | Destabilizing | 0.958 | D | 0.446 | neutral | None | None | None | None | I |
R/D | 0.247 | likely_benign | 0.2436 | benign | 0.062 | Stabilizing | 0.055 | N | 0.322 | neutral | None | None | None | None | I |
R/E | 0.1387 | likely_benign | 0.1328 | benign | 0.153 | Stabilizing | None | N | 0.137 | neutral | None | None | None | None | I |
R/F | 0.2933 | likely_benign | 0.2754 | benign | -0.331 | Destabilizing | 0.497 | N | 0.511 | neutral | None | None | None | None | I |
R/G | 0.0933 | likely_benign | 0.0956 | benign | -0.553 | Destabilizing | 0.081 | N | 0.343 | neutral | N | 0.513702992 | None | None | I |
R/H | 0.086 | likely_benign | 0.086 | benign | -0.97 | Destabilizing | 0.667 | D | 0.428 | neutral | None | None | None | None | I |
R/I | 0.1297 | likely_benign | 0.115 | benign | 0.371 | Stabilizing | 0.124 | N | 0.471 | neutral | None | None | None | None | I |
R/K | 0.0675 | likely_benign | 0.0629 | benign | -0.288 | Destabilizing | None | N | 0.134 | neutral | N | 0.450016873 | None | None | I |
R/L | 0.1232 | likely_benign | 0.1121 | benign | 0.371 | Stabilizing | None | N | 0.235 | neutral | None | None | None | None | I |
R/M | 0.1245 | likely_benign | 0.1106 | benign | 0.004 | Stabilizing | 0.427 | N | 0.458 | neutral | N | 0.484593594 | None | None | I |
R/N | 0.2001 | likely_benign | 0.187 | benign | 0.15 | Stabilizing | 0.002 | N | 0.149 | neutral | None | None | None | None | I |
R/P | 0.2424 | likely_benign | 0.2241 | benign | 0.171 | Stabilizing | 0.364 | N | 0.5 | neutral | None | None | None | None | I |
R/Q | 0.0752 | likely_benign | 0.0741 | benign | -0.014 | Destabilizing | 0.005 | N | 0.148 | neutral | None | None | None | None | I |
R/S | 0.1504 | likely_benign | 0.1449 | benign | -0.426 | Destabilizing | 0.042 | N | 0.283 | neutral | N | 0.412690636 | None | None | I |
R/T | 0.0788 | likely_benign | 0.0736 | benign | -0.174 | Destabilizing | 0.081 | N | 0.348 | neutral | N | 0.429102883 | None | None | I |
R/V | 0.1444 | likely_benign | 0.1326 | benign | 0.171 | Stabilizing | 0.055 | N | 0.379 | neutral | None | None | None | None | I |
R/W | 0.1436 | likely_benign | 0.1367 | benign | -0.184 | Destabilizing | 0.946 | D | 0.455 | neutral | N | 0.473723239 | None | None | I |
R/Y | 0.2276 | likely_benign | 0.2189 | benign | 0.175 | Stabilizing | 0.859 | D | 0.51 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.