Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5734 | 17425;17426;17427 | chr2:178731566;178731565;178731564 | chr2:179596293;179596292;179596291 |
N2AB | 5417 | 16474;16475;16476 | chr2:178731566;178731565;178731564 | chr2:179596293;179596292;179596291 |
N2A | 4490 | 13693;13694;13695 | chr2:178731566;178731565;178731564 | chr2:179596293;179596292;179596291 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.811 | N | 0.569 | 0.197 | 0.360961692134 | gnomAD-4.0.0 | 1.61419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0641E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4728 | ambiguous | 0.4285 | ambiguous | -0.138 | Destabilizing | 0.919 | D | 0.545 | neutral | None | None | None | None | N |
K/C | 0.788 | likely_pathogenic | 0.749 | pathogenic | -0.338 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
K/D | 0.664 | likely_pathogenic | 0.6031 | pathogenic | 0.168 | Stabilizing | 0.976 | D | 0.52 | neutral | None | None | None | None | N |
K/E | 0.1857 | likely_benign | 0.1662 | benign | 0.225 | Stabilizing | 0.811 | D | 0.569 | neutral | N | 0.492519643 | None | None | N |
K/F | 0.8834 | likely_pathogenic | 0.8649 | pathogenic | -0.037 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | N |
K/G | 0.4839 | ambiguous | 0.4428 | ambiguous | -0.424 | Destabilizing | 0.959 | D | 0.476 | neutral | None | None | None | None | N |
K/H | 0.3325 | likely_benign | 0.3183 | benign | -0.65 | Destabilizing | 0.997 | D | 0.599 | neutral | None | None | None | None | N |
K/I | 0.6225 | likely_pathogenic | 0.5731 | pathogenic | 0.56 | Stabilizing | 0.988 | D | 0.616 | neutral | None | None | None | None | N |
K/L | 0.5224 | ambiguous | 0.4843 | ambiguous | 0.56 | Stabilizing | 0.919 | D | 0.476 | neutral | None | None | None | None | N |
K/M | 0.3882 | ambiguous | 0.3555 | ambiguous | 0.261 | Stabilizing | 0.999 | D | 0.603 | neutral | N | 0.504610413 | None | None | N |
K/N | 0.4937 | ambiguous | 0.4439 | ambiguous | -0.016 | Destabilizing | 0.968 | D | 0.507 | neutral | D | 0.526517574 | None | None | N |
K/P | 0.9189 | likely_pathogenic | 0.892 | pathogenic | 0.358 | Stabilizing | 0.996 | D | 0.594 | neutral | None | None | None | None | N |
K/Q | 0.1098 | likely_benign | 0.1084 | benign | -0.127 | Destabilizing | 0.251 | N | 0.197 | neutral | N | 0.444570981 | None | None | N |
K/R | 0.0815 | likely_benign | 0.0833 | benign | -0.231 | Destabilizing | 0.026 | N | 0.238 | neutral | N | 0.478878343 | None | None | N |
K/S | 0.4391 | ambiguous | 0.4031 | ambiguous | -0.59 | Destabilizing | 0.919 | D | 0.518 | neutral | None | None | None | None | N |
K/T | 0.2423 | likely_benign | 0.2146 | benign | -0.355 | Destabilizing | 0.984 | D | 0.532 | neutral | N | 0.509065177 | None | None | N |
K/V | 0.5455 | ambiguous | 0.5005 | ambiguous | 0.358 | Stabilizing | 0.988 | D | 0.52 | neutral | None | None | None | None | N |
K/W | 0.8046 | likely_pathogenic | 0.7933 | pathogenic | 0.018 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
K/Y | 0.7493 | likely_pathogenic | 0.7211 | pathogenic | 0.328 | Stabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.