Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 5740 | 17443;17444;17445 | chr2:178731548;178731547;178731546 | chr2:179596275;179596274;179596273 |
N2AB | 5423 | 16492;16493;16494 | chr2:178731548;178731547;178731546 | chr2:179596275;179596274;179596273 |
N2A | 4496 | 13711;13712;13713 | chr2:178731548;178731547;178731546 | chr2:179596275;179596274;179596273 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs779492952 | 0.281 | 0.134 | N | 0.092 | 0.185 | 0.144782658237 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
S/T | rs779492952 | 0.281 | 0.134 | N | 0.092 | 0.185 | 0.144782658237 | gnomAD-4.0.0 | 6.39799E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14952E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0838 | likely_benign | 0.0873 | benign | -0.443 | Destabilizing | 0.079 | N | 0.063 | neutral | None | None | None | None | I |
S/C | 0.1653 | likely_benign | 0.1589 | benign | -0.244 | Destabilizing | 0.999 | D | 0.362 | neutral | N | 0.487809605 | None | None | I |
S/D | 0.4414 | ambiguous | 0.4708 | ambiguous | 0.312 | Stabilizing | 0.759 | D | 0.195 | neutral | None | None | None | None | I |
S/E | 0.5592 | ambiguous | 0.5591 | ambiguous | 0.213 | Stabilizing | 0.17 | N | 0.11 | neutral | None | None | None | None | I |
S/F | 0.2072 | likely_benign | 0.2156 | benign | -1.085 | Destabilizing | 0.997 | D | 0.375 | neutral | None | None | None | None | I |
S/G | 0.121 | likely_benign | 0.13 | benign | -0.535 | Destabilizing | 0.826 | D | 0.277 | neutral | N | 0.486795647 | None | None | I |
S/H | 0.3991 | ambiguous | 0.4063 | ambiguous | -1.067 | Destabilizing | 0.991 | D | 0.364 | neutral | None | None | None | None | I |
S/I | 0.1777 | likely_benign | 0.1861 | benign | -0.328 | Destabilizing | 0.976 | D | 0.385 | neutral | N | 0.50920125 | None | None | I |
S/K | 0.753 | likely_pathogenic | 0.7639 | pathogenic | -0.348 | Destabilizing | 0.939 | D | 0.193 | neutral | None | None | None | None | I |
S/L | 0.132 | likely_benign | 0.1416 | benign | -0.328 | Destabilizing | 0.939 | D | 0.321 | neutral | None | None | None | None | I |
S/M | 0.2564 | likely_benign | 0.2639 | benign | -0.01 | Destabilizing | 0.997 | D | 0.361 | neutral | None | None | None | None | I |
S/N | 0.155 | likely_benign | 0.1721 | benign | -0.051 | Destabilizing | 0.134 | N | 0.117 | neutral | N | 0.499426973 | None | None | I |
S/P | 0.429 | ambiguous | 0.5227 | ambiguous | -0.339 | Destabilizing | 0.997 | D | 0.373 | neutral | None | None | None | None | I |
S/Q | 0.5579 | ambiguous | 0.559 | ambiguous | -0.323 | Destabilizing | 0.939 | D | 0.307 | neutral | None | None | None | None | I |
S/R | 0.6392 | likely_pathogenic | 0.6529 | pathogenic | -0.181 | Destabilizing | 0.92 | D | 0.357 | neutral | N | 0.512990916 | None | None | I |
S/T | 0.0766 | likely_benign | 0.0773 | benign | -0.203 | Destabilizing | 0.134 | N | 0.092 | neutral | N | 0.42450514 | None | None | I |
S/V | 0.1614 | likely_benign | 0.1634 | benign | -0.339 | Destabilizing | 0.939 | D | 0.327 | neutral | None | None | None | None | I |
S/W | 0.4017 | ambiguous | 0.4184 | ambiguous | -1.065 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
S/Y | 0.2147 | likely_benign | 0.2275 | benign | -0.784 | Destabilizing | 0.997 | D | 0.373 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.