Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC574017443;17444;17445 chr2:178731548;178731547;178731546chr2:179596275;179596274;179596273
N2AB542316492;16493;16494 chr2:178731548;178731547;178731546chr2:179596275;179596274;179596273
N2A449613711;13712;13713 chr2:178731548;178731547;178731546chr2:179596275;179596274;179596273
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: AGC
  • RefSeq wild type template codon: TCG
  • Domain: Ig-41
  • Domain position: 11
  • Structural Position: 14
  • Q(SASA): 0.5577
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/T rs779492952 0.281 0.134 N 0.092 0.185 0.144782658237 gnomAD-2.1.1 4.06E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.98E-06 0
S/T rs779492952 0.281 0.134 N 0.092 0.185 0.144782658237 gnomAD-4.0.0 6.39799E-06 None None None None I None 0 0 None 0 0 None 0 0 1.14952E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0838 likely_benign 0.0873 benign -0.443 Destabilizing 0.079 N 0.063 neutral None None None None I
S/C 0.1653 likely_benign 0.1589 benign -0.244 Destabilizing 0.999 D 0.362 neutral N 0.487809605 None None I
S/D 0.4414 ambiguous 0.4708 ambiguous 0.312 Stabilizing 0.759 D 0.195 neutral None None None None I
S/E 0.5592 ambiguous 0.5591 ambiguous 0.213 Stabilizing 0.17 N 0.11 neutral None None None None I
S/F 0.2072 likely_benign 0.2156 benign -1.085 Destabilizing 0.997 D 0.375 neutral None None None None I
S/G 0.121 likely_benign 0.13 benign -0.535 Destabilizing 0.826 D 0.277 neutral N 0.486795647 None None I
S/H 0.3991 ambiguous 0.4063 ambiguous -1.067 Destabilizing 0.991 D 0.364 neutral None None None None I
S/I 0.1777 likely_benign 0.1861 benign -0.328 Destabilizing 0.976 D 0.385 neutral N 0.50920125 None None I
S/K 0.753 likely_pathogenic 0.7639 pathogenic -0.348 Destabilizing 0.939 D 0.193 neutral None None None None I
S/L 0.132 likely_benign 0.1416 benign -0.328 Destabilizing 0.939 D 0.321 neutral None None None None I
S/M 0.2564 likely_benign 0.2639 benign -0.01 Destabilizing 0.997 D 0.361 neutral None None None None I
S/N 0.155 likely_benign 0.1721 benign -0.051 Destabilizing 0.134 N 0.117 neutral N 0.499426973 None None I
S/P 0.429 ambiguous 0.5227 ambiguous -0.339 Destabilizing 0.997 D 0.373 neutral None None None None I
S/Q 0.5579 ambiguous 0.559 ambiguous -0.323 Destabilizing 0.939 D 0.307 neutral None None None None I
S/R 0.6392 likely_pathogenic 0.6529 pathogenic -0.181 Destabilizing 0.92 D 0.357 neutral N 0.512990916 None None I
S/T 0.0766 likely_benign 0.0773 benign -0.203 Destabilizing 0.134 N 0.092 neutral N 0.42450514 None None I
S/V 0.1614 likely_benign 0.1634 benign -0.339 Destabilizing 0.939 D 0.327 neutral None None None None I
S/W 0.4017 ambiguous 0.4184 ambiguous -1.065 Destabilizing 0.999 D 0.461 neutral None None None None I
S/Y 0.2147 likely_benign 0.2275 benign -0.784 Destabilizing 0.997 D 0.373 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.